Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0608 ATGGCGAAATCCAGTGCTGACGATATTGAACTTCGTCGAGCTTGCGTGTCTGCGATTGATGATCCAACACAGAAGATCATCATTTCAATTCGCGTTTCTAAGAGTCGCGGGATCTTCGTAAATTCCTCCAACCTTAGTCATCAAATGGCCAAGCCTAGGGTTCTCGCTCTCTTCACACAATCAAAAGGTCAGAGCACAACTGCTTTTCTTCGAGTTTTGAAATATTCTACAGGAGGAGTTCTTGAGCCTGCAAAACTATACAAGCTAAAGCACCTCTCAAAAGTGGAAGTTATGACTAATGATCCCAGCGGATGTATGTTTACACTGGGATTTGATAATCTTAGAAGTCAGAGTGTGGCTCCTCCTCAGTGGACAATGCGCAGTATTGATGACAGGAATCGCCTCCTTCTCTGCATCTTAAACATCTGCAAAGATGTGTTGGGTCACCTTCCAAGGGTTGTTGGTATAGATGTTGTGGAGATGGCTCTCTGGGCTAAGGAAAATAGATCCTCAGTTTCTACTACAAGGAATGTGCAAGATGGTGGTCTTGGTGCATTTGCTGGTCCTGAGACCGAGTTGAAAGTCAATGTCGAAAAGGAACTTGTCTCCCAAGCAGAGGAAGAGGAGATGGAGGCTCTTTTGGGAACTTATGTCATGGGTATTGGGGAAGCAGAGGCATTTTCGGAAAGGTTGAAGAGAGAGCTCCAGGGTCTAGAAGCAGCAAATGTGCATGCCCTTTTAGAAAGTGAACCTTTGATAGATGAGGTGATGCAAGGGCTTGAATCAGCAACAATTTGTGTGGAAGACATGGATGAGTGGTTAGGTGCATTAAACGAGAAACTCCATCACATGAGAGGGGATATTGAGTCAATAGAAACCCGCAATAACATGTTGGTAATGCAATCGGTTAATAACAAGTCTCTCATTGAGGAACTTGATAAGCTTCTTGAGCGGCTGTGTGTCCCTTCTGAGTACGCAGCATCTTTGACTGGAGGTTCTTTTGATGAAGCTCGAATGCCTCAGAATGTAGAAGCGTGTGAATGGTTAACTAGTGCCTTGCATGGTATTGAAGCACCTAATCTAGACCCTGCATATGAAAACATGAGAGCTGTTAAAGAGAAGCGTGCAGAACTTGAAAAACTAAAATCTACCTTTGTGAGGAGAGCTTCTGAGTTCTTGAGAAATTACTTTGCTAGTTTGGTTGACTTCATGATAAGTGATAAAAGTTACTTTTCTCAGCGGGGACAGTTGAAGAGGCCTGATCATGCTGACCTGCGGTACAAGTGCAGAACATACGCGCGTCTTCTGCAGCATTTAAAGAGTCTTGACAAGAATTGCTTGGGTCCATTGAGAAAAGCTTATTGCAGTTCTCTAAACTTGCTTCTTCGTAGAGAGGCTCGTGAGTTTGCAAATGAGCTTCGTGCTAGTACTAAAGCATCCAGAAATCCAACTATTTGGCTTGAAGGTTCCACAGGTTCTGGTCAGAATGCAAATGCTACTGATACTTCTGCAGTCTCTGATGCATATGCAAAGATGCTCACAATTTTTATCCCACTTCTGGTGGATGAGAGCTCTTTTTTTGCACACTTCATGTGCTTCGAAGTTCCTACACTTGTTCCTCCAGGAGGTGTTTTTGTTGGCAAAAAAGCTAGATATGATGATGATGATGATTTGGGAATTATGGACATCGACGAGAATGATAGCAAATCTGGTAAAATTTCTGCAGAGCTTGCAGCTTTAAATGGATCACTTCAGGACTTGCTTAATGGAATTCAAGAAGACTTTTATGCTGTTGTGGATTGGGCGTACAAGATTGATCCTTTACGCTGCATATCAATGCATGGAATTACAGAACGCTATCTCTCTGGTCAGAAAGCTGACGCAGCAGGATTTGTACGCCTTTTGCTTGGTGACCTGGAGTCTAGGATATCTATGCAGTTCAGTCGTTTTGTTGATGAAGCTTGCCATCAAATTGAAAGAAGTGAGCGCACTGTTCGTCAAATGGGTGTCCTGTCCTACATCCCCAGATTTGCAACCCTTGCAACTCGGATGGAGCAGTACATTTCGGGACAGTCTAGGGATTTGGTTGACAAATCATACACTAAATTTGTAGGCATAATGTTTGCGACTTTGGAAAAAATTGCTCAAACAGATCCAAAATTTGCAGATATGTTTCTACTAGAAAACTATGCCGCCTTTCAGAATAGTTTGTATGACCTCGCCAACATTGTGCCCATTTTGGCCAAGTTTTATCATCAAGCCAGTGAAGCCTATGAACAAGCATGTACACGGCATATTAGCATGATTATATACTATCAATTTGAACGTCTTTTCCAGTTTGCTAGAAGGATTGAAGACTTGATGTTCACAGTTCCACCTGAAGAGATTCCTTTCCAACTTGGACTGTCAAAACTGGATCTTCGGAAGATGTTAAAATCTAGTTTATCTGGGGTTGACAAATCCATTGCTATGATGCATAAGAAACTACAGAAGAATTTGGTTTCAGACGAATTGTTACCCTCCTTGTGGGACAAATGCAAGAAGGAGTTCCTTGACATGTATGAAGGTTTTGCTCAACTTGTGGCCAAGATTTACCCCTCTGAGAATGTCCCTTCTGTAGAGGAGATGAGAGAACTTTTAGCTTCCATGTGA 2652 0.4253 MAKSSADDIELRRACVSAIDDPTQKIIISIRVSKSRGIFVNSSNLSHQMAKPRVLALFTQSKGQSTTAFLRVLKYSTGGVLEPAKLYKLKHLSKVEVMTNDPSGCMFTLGFDNLRSQSVAPPQWTMRSIDDRNRLLLCILNICKDVLGHLPRVVGIDVVEMALWAKENRSSVSTTRNVQDGGLGAFAGPETELKVNVEKELVSQAEEEEMEALLGTYVMGIGEAEAFSERLKRELQGLEAANVHALLESEPLIDEVMQGLESATICVEDMDEWLGALNEKLHHMRGDIESIETRNNMLVMQSVNNKSLIEELDKLLERLCVPSEYAASLTGGSFDEARMPQNVEACEWLTSALHGIEAPNLDPAYENMRAVKEKRAELEKLKSTFVRRASEFLRNYFASLVDFMISDKSYFSQRGQLKRPDHADLRYKCRTYARLLQHLKSLDKNCLGPLRKAYCSSLNLLLRREAREFANELRASTKASRNPTIWLEGSTGSGQNANATDTSAVSDAYAKMLTIFIPLLVDESSFFAHFMCFEVPTLVPPGGVFVGKKARYDDDDDLGIMDIDENDSKSGKISAELAALNGSLQDLLNGIQEDFYAVVDWAYKIDPLRCISMHGITERYLSGQKADAAGFVRLLLGDLESRISMQFSRFVDEACHQIERSERTVRQMGVLSYIPRFATLATRMEQYISGQSRDLVDKSYTKFVGIMFATLEKIAQTDPKFADMFLLENYAAFQNSLYDLANIVPILAKFYHQASEAYEQACTRHISMIIYYQFERLFQFARRIEDLMFTVPPEEIPFQLGLSKLDLRKMLKSSLSGVDKSIAMMHKKLQKNLVSDELLPSLWDKCKKEFLDMYEGFAQLVAKIYPSENVPSVEEMRELLASM 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0608 883 PANTHER SEC3/SYNTAXIN-RELATED 1 883 - -
Lal8g0608 883 Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH 49 144 IPR028258 -
Lal8g0608 883 Coils Coil 221 248 - -
Lal8g0608 883 Pfam Exocyst complex component Sec3 224 483 IPR019160 GO:0000145|GO:0006887
Lal8g0608 883 Pfam Exocyst complex component Sec3 579 866 IPR019160 GO:0000145|GO:0006887
Lal8g0608 883 PANTHER EXOCYST COMPLEX COMPONENT SEC3B 1 883 - -
Lal8g0608 883 SMART Sec3_PIP2_bind_2 48 146 IPR028258 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0608 Lal-Chr8 4213190 4225630 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0608 8 4213190 4225630 Lal8g0608 8 4213190 4225630 ECH
Lal8g0608 8 4213190 4225630 Lal25g0566 25 4175734 4195439 LSH
Lal8g0608 8 4213190 4225630 Lal10g0795 10 15658524 15673098 LSH