Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0581 ATGTCCATTTCGTTCTCTTCAATTCATGCTCGTCTCACACTCCTCGCTCTCTTCTCCGCCACCACCTTCTACTGCTTCTACAAATCTCGCCGCCTCAGAAACCTTAAATTCTCCCTCTCTAACCGTTTTTCCAACGCAAACCCTAAAAAACCTATGATTATATTCCTCTCCCAAACCGGAACCTCTAAAACCCTAGCTCACCGCCTCCACCGGTTGCTCTCGTCCAGCGACGTCGTTTTTGACCTTGTCGATTCCAAAAACTACGAGCCCGAGGACCTCGCAAAAGAAACACTCGTGCTTGTTGTTGCTTCTACTTGGGAAGATGGAAAGCCACCTTCTGGTTCTAACTTCCTTGCCACGTGGCTATCTGAAACCGCCACTGATTTTAGGGTTGGATCTCTATTGCTGTCGAGGTGCAGGTTCGCGGTGTTTGGCGTTGGGAGCAGGGCGTATGGAGAGACGTTTAATGCTGTGGCGAGGGATTTCGCTTCGCAGATGAAGGCGCTGGGTGCGACGGAGATTGTCCCGATGTGGGAAGGGGATGTGGATGGGGGAAATTTGGATGAGGATTTTGAGATTTGGTGTGGGAAGGTTGTTGGGGTTTTGAAAGGTGGTGGTGCATTGGAAAATGGTGTTGTTGATGGTGATGGTGGGGAATGTGGTAATGATTCGAGTTTTGAGGATTCTGATGATGAGAGTGAGCCAGAATCGGAGATTGTTGATCTTGAGGATATTGCTGGTAAAGCACCCTCGAGGAAATCGGTGGCAGTTGTTGAAAGTAATGGGAAATTGAATGGCAAAAAAGAAATGGTGACTCCTGTGATTAGGGCAAATTTAGTGAAGCAGGGATATAAAATTATTGGTTCACATAGCGGTGTTAAGATTTGTAGATGGACCAAGTCACAGCTTCGTGGTCGAGGCGGTTGCTACAAGCATTCATTTTATGGAATTGAGAGTCATAGGTGCATGGAGGCAACCCCTAGCTTGGCATGTGCAAATAAATGTGTTTTCTGCTGGAGGCATCACACAAATCCAGTAGCGAAAAGTTGGCAGTGGGAGATGGATGACCCAGTAGAGATTGTAAATTCGGCAATAGAACTGCATACAAATATGATTAAACAAATGAAAGGAGTTCCAGGTGTCACCTTGGAGCGATTAAATGAAGGTCTCTCTCCAAGACATTGTGCATTATCTCTTGTTGGTGAACCGATCATGTATCCGGAGATAAATACACTTGTTGATGAGCTGCACAAAAGGAGAATTTCCACTTTTCTTGTGACAAATGCACAATTTCCAGATAAAATTAAGTTGCTGAGGCCTATCACCCAGTTATATGTCAGTGTAGATGCTGCTACAAAGGACTCTTTGAAGGCGATTGATAGGCCACTCTTTGGAGATTTCTGGGAGCGATTCATTGATTCCTTGACTGCTCTAAAGGAAAAACATCAGCGAACTGTATACCGCCTGACTCTGGTGAAAGGTTGGAATACTGAAGATATTGATGCTTATTTTAAGCTCTTTAGTATAGGAGAACCTGACTTTATTGAAATCAAGGGAGTTACATATTGTGGCTCGACTGCAACATCAAAATTGACAATGGAAAATGTCCCTTGGCATGCTGATGTAAAAGCTTTCTCAGAGGCACTGGCTCTGAAAAGCCAAGGGGAGTATGAAGTTGCTTGTGAGCATGCTCACTCGTGTTGTGTCCTCTTAGCAAAAACTAAGAAGTTCAAGATTGATGGCCAATGGTATACATGGATAGATTATGAAAAATTTCATGACCTGGTGGCTTCTGGAAGTACTTTTGACAGCACAGATTACATGGCTACCACACCATCATGGGCCGTCTATGGAGCAGAGGAAAGTGGATTTGATCCTGCACAATCGCGATTTAAGAAAGAGAGACATCATAAGTCAAGCCGTGTTCAATCAAGCTAG 1938 0.4463 MSISFSSIHARLTLLALFSATTFYCFYKSRRLRNLKFSLSNRFSNANPKKPMIIFLSQTGTSKTLAHRLHRLLSSSDVVFDLVDSKNYEPEDLAKETLVLVVASTWEDGKPPSGSNFLATWLSETATDFRVGSLLLSRCRFAVFGVGSRAYGETFNAVARDFASQMKALGATEIVPMWEGDVDGGNLDEDFEIWCGKVVGVLKGGGALENGVVDGDGGECGNDSSFEDSDDESEPESEIVDLEDIAGKAPSRKSVAVVESNGKLNGKKEMVTPVIRANLVKQGYKIIGSHSGVKICRWTKSQLRGRGGCYKHSFYGIESHRCMEATPSLACANKCVFCWRHHTNPVAKSWQWEMDDPVEIVNSAIELHTNMIKQMKGVPGVTLERLNEGLSPRHCALSLVGEPIMYPEINTLVDELHKRRISTFLVTNAQFPDKIKLLRPITQLYVSVDAATKDSLKAIDRPLFGDFWERFIDSLTALKEKHQRTVYRLTLVKGWNTEDIDAYFKLFSIGEPDFIEIKGVTYCGSTATSKLTMENVPWHADVKAFSEALALKSQGEYEVACEHAHSCCVLLAKTKKFKIDGQWYTWIDYEKFHDLVASGSTFDSTDYMATTPSWAVYGAEESGFDPAQSRFKKERHHKSSRVQSS 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0581 645 CDD Radical_SAM 327 527 - -
Lal8g0581 645 SUPERFAMILY Flavoproteins 48 202 IPR029039 -
Lal8g0581 645 PRINTS Flavodoxin signature 52 65 IPR001094 GO:0010181
Lal8g0581 645 PRINTS Flavodoxin signature 100 111 IPR001094 GO:0010181
Lal8g0581 645 PRINTS Flavodoxin signature 138 148 IPR001094 GO:0010181
Lal8g0581 645 PRINTS Flavodoxin signature 163 182 IPR001094 GO:0010181
Lal8g0581 645 Pfam Wyosine base formation 510 573 IPR013917 -
Lal8g0581 645 Gene3D - 27 209 IPR029039 -
Lal8g0581 645 Gene3D Aldolase class I 253 585 IPR013785 -
Lal8g0581 645 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE 6 639 IPR034556 GO:0008033|GO:0051539
Lal8g0581 645 SFLD Radical SAM 266 577 IPR007197 GO:0003824|GO:0051536
Lal8g0581 645 ProSiteProfiles Flavodoxin-like domain profile. 51 199 IPR008254 GO:0010181
Lal8g0581 645 MobiDBLite consensus disorder prediction 213 235 - -
Lal8g0581 645 ProSiteProfiles Radical SAM core domain profile. 315 558 IPR007197 GO:0003824|GO:0051536
Lal8g0581 645 Pfam Radical SAM superfamily 327 506 IPR007197 GO:0003824|GO:0051536
Lal8g0581 645 SFLD tRNA wybutosine-synthesizing 266 577 IPR034556 GO:0008033|GO:0051539
Lal8g0581 645 SUPERFAMILY Radical SAM enzymes 328 508 - -
Lal8g0581 645 MobiDBLite consensus disorder prediction 221 235 - -
Lal8g0581 645 Pfam Flavodoxin 53 194 IPR008254 GO:0010181
Lal8g0581 645 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE 6 639 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0581 8 4036592 4041668 Lal8g0581 8 4036592 4041668 ECH