Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0579 ATGGTTGTGCAAAGAAGACTAACACTGAGTGCAGTTATAATCTTACTGTTCGTTCAGTTAGGTTTTTGTTTGAATTCCAGAACAGAATGGTTATCATTACTTGAACTCCGTTCATCCTTAGGGATAAGGGGGAAAGACTGGCCAATAAAAGCCGAACCGTGCCGGAATTGGACCGGGGTTCAGTGCCGGAACGGTCGAGTTATTGGGATCAATATAACTGGGTTGAAACGAACCCGGTTCGGTCGTGTTGACCCAAGCTTCAATGTTGATGCTCTTGCCAATTTCACAATCTTAGCTTCATTCAATGCTTCTGGGTTCATGCTAAATGGGTCTATACCAGAGTGGTTTGGTCAATATCTTAGTGCACTCCAAGTGCTTGATCTAAGGTCTTGTTCTATAACCGATTTGATTCCTGAGTCACTTAAGGGTTTGAGTATGTTGAAGACTTTGTTACTTTCAGGGAATAGTTTAACTGGTAGAATCCCTTCAAGTTTGGGTTTGTTATCTGAGCTATCAGTTCTCGATCTCTCCGGAAATTCACTTTCAGGATCAGTGCCTAACTCTTTGTGGAAGCTTGGTAATTTAACAAGCCTTGATCTCTCTTTTAATTTCTTATCAGGGTCTATTCCACCTGAACTGGGTTCCCTTTCAAATCTCCATATTTTGAACCTTTCTGACAATGGACTCACTGGTTCCATCCCTATTCAACTTGGTACCCTTTCCAAGTTGGTCGAGCTTGATCTTGGGATGAATTCACTGTCTGGTTCATTGCCAGATAGTTTATTTTCTAGAACTTTTGACATTAAAGTCCTCATTCTCAGAGGAAATATGTTTGGTGGCGCTCTTCCTAATTCCTTGTGGTCATTGCCTAGCTTGCGTTTTCTTGATTTGTCCAGCAACAACCTCACTGGTCCCCTACCGAAACTAGCAAACGTTGGCTCTAATGGTTCCATATTCAATCTTTCAATCAATTTGTTCTATGGATCTTTGAATATTTCACTGAACAGGTTTAAAATGATCGATTTGTCCGGTAATTATTTGCAAGGTGAGGTGCAAGGTGGTGGTAATGTTACTCTCTCTAGGAATTGCTTACAGATTATTCCAGACCAAAGGGATTTGAGAGAGTGTAGACTGTTTTATAGTCAGAGAAATTTACCCTTTACTCCTGGTGTCCAAGAAGCAACTCAATCGCCGTTCCCAAAATCTGAGTCCTCGAACAACAAACGAGTGATATTCATACTGGCAGGTACAATTGGTGGACTTGGCTTTACTGTGCTTGTAGTATTGGTCCTCATATTGATCCTAAGACATTGTAGTAATCATAGTACTTCGGCAATTAGAAGAGGGACCACAAATGGGGGACCTATTCCAGAAGGGGAAAGTCCTACACCTCCCAAGGATCCTGTCTTTGTAACTGGTGTGGGAGAAGCATTTACTTTTGAGCAAATTCTTCATTTGACTGGTAATTTTTCTGAAGCAAATATCATCAAGCACGGTCATTCTGGAGACTTCTTTTGGGGACTCGTGGAAGGTGGAGCAACTGTGGTTGTTAAAAAAGTGGATTTAAATTTATTCAAGAGAGAGTCATACATTGTAGAATTAGGACTATTAAGCAAGGTTTCACATGCAAGATTGGTCCCGATCCTGGGGCACTGTTTGGAGAATGCAAATGAGAAATGTATAATTTACAAGTATATGCCAAATGGAGATTTGGCTACTTCCTTTCACAGAGTCACCGGTTCAGATGGTAAATTACAGTCCTTGGATTGGATCACGAGATTGAAAATTGCAATAGGAGCTGCTGAAGGCCTAGCTTACCTACATGAGTCCAGCCCTCCCCTTGTTCACAGAGATGTCCAAGCTAGCAGTATACTTCTTGATGATAAATTTGAAGTGCGACTTGGAAGTTTGAGTGAGGTTACTTCCCAAGGAGATCTTCATCAGAGTGTCTTCTCAAGGCTTTTCAGCAAGCCATTATCTTTTAATCAAGGGAATCCTGGTGAGTTAATTGGTTTTCCCTTGCTAGGTACATCATCTGTGACTAGTGACTTTGATGTCTATTGTTTTGGGAAGATTTTACTGGAGCTAGTTACTGGTAACCTTGATGTCAGTAGTTCAGATGATGCCACCACAAAAGAGTGGATAGAACAAACCTTGTCTTACATAACCATATATGATAAAGAACGGGTGACTAAGATTTTAGACCCATCTTTGATAGTAGATGAGGACCTATTGGAAGAGGCATGGGCTATGGCAATTGTGGCGAGATCATGCCTGAATCCTAAGCCTTCGAAACGTCCTCTCATGAGACATGTCCTCAAAGCACTGGAAAATCCGTTGAAGGTTGTCAGAGAAGACAATGGTAGCTCGGCAAGGTTGAGAACAACTTCATCTAGGAGATCTTGGGGCACTGCATTCTTCGGTAGTTGGAGACATAGCTCATCAGAGAATGCTACTTCCACAGGGAATGCAAGGGAGGGTACTAGTAGCTTTAAACAATCAGATAGAGTAGGTTCTCAGAGTAGTACCGGAAATGATCATTCGTCTTCGCATAAAAGGTCATCTAATGAAATATTCCCTGAACCATTGGAAATGCAAGAGGTGGAGTTTGGAGAAGCAAGATGA 2625 0.416 MVVQRRLTLSAVIILLFVQLGFCLNSRTEWLSLLELRSSLGIRGKDWPIKAEPCRNWTGVQCRNGRVIGINITGLKRTRFGRVDPSFNVDALANFTILASFNASGFMLNGSIPEWFGQYLSALQVLDLRSCSITDLIPESLKGLSMLKTLLLSGNSLTGRIPSSLGLLSELSVLDLSGNSLSGSVPNSLWKLGNLTSLDLSFNFLSGSIPPELGSLSNLHILNLSDNGLTGSIPIQLGTLSKLVELDLGMNSLSGSLPDSLFSRTFDIKVLILRGNMFGGALPNSLWSLPSLRFLDLSSNNLTGPLPKLANVGSNGSIFNLSINLFYGSLNISLNRFKMIDLSGNYLQGEVQGGGNVTLSRNCLQIIPDQRDLRECRLFYSQRNLPFTPGVQEATQSPFPKSESSNNKRVIFILAGTIGGLGFTVLVVLVLILILRHCSNHSTSAIRRGTTNGGPIPEGESPTPPKDPVFVTGVGEAFTFEQILHLTGNFSEANIIKHGHSGDFFWGLVEGGATVVVKKVDLNLFKRESYIVELGLLSKVSHARLVPILGHCLENANEKCIIYKYMPNGDLATSFHRVTGSDGKLQSLDWITRLKIAIGAAEGLAYLHESSPPLVHRDVQASSILLDDKFEVRLGSLSEVTSQGDLHQSVFSRLFSKPLSFNQGNPGELIGFPLLGTSSVTSDFDVYCFGKILLELVTGNLDVSSSDDATTKEWIEQTLSYITIYDKERVTKILDPSLIVDEDLLEEAWAMAIVARSCLNPKPSKRPLMRHVLKALENPLKVVREDNGSSARLRTTSSRRSWGTAFFGSWRHSSSENATSTGNAREGTSSFKQSDRVGSQSSTGNDHSSSHKRSSNEIFPEPLEMQEVEFGEAR 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0579 874 Gene3D Ribonuclease Inhibitor 185 264 IPR032675 -
Lal8g0579 874 Gene3D Ribonuclease Inhibitor 265 362 IPR032675 -
Lal8g0579 874 ProSiteProfiles cAMP/cGMP binding motif profile. 495 548 IPR000595 -
Lal8g0579 874 Gene3D Transferase(Phosphotransferase) domain 1 566 796 - -
Lal8g0579 874 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 280 833 - -
Lal8g0579 874 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 5 262 - -
Lal8g0579 874 Pfam Leucine rich repeat 147 203 IPR001611 GO:0005515
Lal8g0579 874 Gene3D Ribonuclease Inhibitor 28 184 IPR032675 -
Lal8g0579 874 PRINTS Leucine-rich repeat signature 171 184 - -
Lal8g0579 874 PRINTS Leucine-rich repeat signature 289 302 - -
Lal8g0579 874 MobiDBLite consensus disorder prediction 812 849 - -
Lal8g0579 874 SUPERFAMILY L domain-like 46 350 - -
Lal8g0579 874 PANTHER RECEPTOR-LIKE PROTEIN 55 5 262 - -
Lal8g0579 874 PANTHER RECEPTOR-LIKE PROTEIN 55 280 833 - -
Lal8g0579 874 MobiDBLite consensus disorder prediction 812 874 - -
Lal8g0579 874 ProSiteProfiles Protein kinase domain profile. 490 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0579 874 SUPERFAMILY Protein kinase-like (PK-like) 467 776 IPR011009 -
Lal8g0579 874 Pfam Leucine Rich Repeat 123 144 IPR001611 GO:0005515
Lal8g0579 874 SMART LRR_typ_2 168 191 IPR003591 -
Lal8g0579 874 SMART LRR_typ_2 192 216 IPR003591 -
Lal8g0579 874 SMART LRR_typ_2 240 264 IPR003591 -
Lal8g0579 874 SMART LRR_typ_2 289 313 IPR003591 -
Lal8g0579 874 SMART LRR_typ_2 144 167 IPR003591 -
Lal8g0579 874 SMART LRR_typ_2 120 143 IPR003591 -
Lal8g0579 874 Gene3D Phosphorylase Kinase; domain 1 467 565 - -
Lal8g0579 874 Pfam Protein tyrosine and serine/threonine kinase 498 775 IPR001245 GO:0004672|GO:0006468
Lal8g0579 874 MobiDBLite consensus disorder prediction 446 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0579 Lal-Chr8 4024433 4030435 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Lal8g0579 PK_Tyr_Ser-Thr 1.1e-18 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0579 8 4024433 4030435 Lal8g0579 8 4024433 4030435 ECH
Lal8g0579 8 4024433 4030435 Lal25g0553 25 4041467 4046542 LSH