Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0577 ATGAGTTTAAGGGAAGAAAATGAAGAAGAAAAGAATCTAAAGAAACCATTTTTGCATGCAGGAAGCTGGTATCGTATGAGTAATAATGTGAGGCAATCAAGTTTATTTGGTTCAACACAAGCCTTTCGTGATTCCTCCATTTCTGTCTTTCTTTGTGTTTTTATAGTTGCTTTGGGTCCTATTCAGTTTGGTTTCACAGCAGGTTATACATCACCTACACAATCTGCTATCATCAATGATCTTGGTCTCTCAGTCTCTGAGTTCTCTTTCTTTGGTTCTTTATCCAATGTTGGTGCTATGGTTGGAGCAATTGCTAGTGGCCAAATTGCTGAGTATATAGGCCGAAAAGGGTCTTTGATGATTGCATCTATTCCAAATATTATTGGTTGGCTGGTAATCTCATTTGCAAAAGATACTTCTTTTCTATATATGGGAAGGTTGTTGGAAGGGTTTGGTGTGGGAATAATATCTTACACGGTACCTGTATATATAGCTGAGATAGCACCTCAAAACTTGAGAGGAGCACTGGTTTCAGTTAACCAGCTTTCTGTAGCCATTGGAACTATGCTGGCTTATTTGCTGGGGATTTTTGTGGAATGGAGAATCCTTGCAGTTTTAGGAATTTTACCATGTACTTTATTGACACTTGCTCTATTTTTCATTCCCGAGTCTCCAAGATGGCTCGCAAAAATAGGATTGATAGACGAATTCGAAACTTCTCTACAAGTGCTGCGAGGTTTTGATGTTGATATTTCGGTCGAAGTAAATGAAATTAAGAGATCTCTTGCATCAACAAACAAAAGTACTACAATTCGATTTGCAGAACTTAAACAAAGAAGATATCGGCTTCCGTTGATGATTGGAATTGGACTACTTATTCTGCAACAACTATCTGGAATAAATGGTGTTTTCTTTTATTCTAGTACCATATTTCAAAATGCTGGAATAACTTCGAGCGACGTAGCTACATTTGGAGTTGGTATTGTTCAGGTTCTTGCCACTTGTGTAACACTGTGGCTGGTAGACAAATCTGGTCGACGCCTTTTGCTTATTGTCTCTTCAGCAGGAATGGCTTTTAGTCTCTTAGTTGTTGCAATCTCATTCTACATGAAGGATTATGTATCAGAAAACTCTTCTTTACAAGGCATATTGAGCATCTTGTCATTGGTTGGAATTGTGGCCATGGTTATTGCATTCTCTGCAGGAATGGGAGCTATTCCATGGATTATAATGTCTGAGATTCTTCCAATTAACATCAAAGGCCTAGCAGGAAGTGTTGCAACACTTGCCAGTTGGTTATTTTCCTGGTTGGTTACATTGACAGCAAATTTACTCTTGGGTTGGAACTCTGGAGGTACCTTCACTATATATACAGCAGTATGCATTTTTACAGTAGGATTTGTATCTATTTGGGTTCCTGAGACAAAGGGTAAAACTCTTGAAGAAATCCAATTGCTTTTCAAATGA 1467 0.3817 MSLREENEEEKNLKKPFLHAGSWYRMSNNVRQSSLFGSTQAFRDSSISVFLCVFIVALGPIQFGFTAGYTSPTQSAIINDLGLSVSEFSFFGSLSNVGAMVGAIASGQIAEYIGRKGSLMIASIPNIIGWLVISFAKDTSFLYMGRLLEGFGVGIISYTVPVYIAEIAPQNLRGALVSVNQLSVAIGTMLAYLLGIFVEWRILAVLGILPCTLLTLALFFIPESPRWLAKIGLIDEFETSLQVLRGFDVDISVEVNEIKRSLASTNKSTTIRFAELKQRRYRLPLMIGIGLLILQQLSGINGVFFYSSTIFQNAGITSSDVATFGVGIVQVLATCVTLWLVDKSGRRLLLIVSSAGMAFSLLVVAISFYMKDYVSENSSLQGILSILSLVGIVAMVIAFSAGMGAIPWIIMSEILPINIKGLAGSVATLASWLFSWLVTLTANLLLGWNSGGTFTIYTAVCIFTVGFVSIWVPETKGKTLEEIQLLFK 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0577 488 Gene3D MFS general substrate transporter like domains 43 488 IPR036259 -
Lal8g0577 488 PANTHER - 15 486 - -
Lal8g0577 488 CDD MFS_GLUT6_8_Class3_like 50 482 IPR044775 GO:0008643|GO:0051119
Lal8g0577 488 ProSitePatterns Sugar transport proteins signature 1. 106 123 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lal8g0577 488 PANTHER SUGAR TRANSPORTER ERD6-LIKE 6 15 486 - -
Lal8g0577 488 PRINTS Sugar transporter signature 60 70 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal8g0577 488 PRINTS Sugar transporter signature 143 162 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal8g0577 488 PRINTS Sugar transporter signature 295 305 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal8g0577 488 PRINTS Sugar transporter signature 389 410 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal8g0577 488 PRINTS Sugar transporter signature 412 424 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal8g0577 488 SUPERFAMILY MFS general substrate transporter 53 484 IPR036259 -
Lal8g0577 488 ProSitePatterns Sugar transport proteins signature 2. 148 173 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lal8g0577 488 Pfam Sugar (and other) transporter 53 487 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lal8g0577 488 ProSiteProfiles Major facilitator superfamily (MFS) profile. 52 476 IPR020846 GO:0022857
Lal8g0577 488 TIGRFAM SP: MFS transporter, sugar porter (SP) family 42 483 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0577 Lal-Chr8 4003786 4007821 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0577 8 4003786 4007821 Lal8g0577 8 4003786 4007821 ECH
Lal8g0577 8 4003786 4007821 Lal25g0551 25 4016361 4023121 LSH