Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0576 ATGTTTTACAGAACTTTACTTTCAAGGCAAAAATTCAACAAACTCAATGCATTCTTACATTCCCATTTCCCCAAATCTTCTTCCACTTTTCTCACTTTTCCTCACACCATTCATCACTCTACTTCTTATTCTTCTTCAATTTTTCAATCATTCCCTAAGTACTTTCATTCTACCCGAGTCACTCAACTCAGTACCAACTCACTCGTCCCTGTTCTCAATTCTAACGACCTAGGCAACGATGATGATCTTAATACCCATGATGCCACCATGAACGAGTTCTTATCTCGATTCGTGTGGATAATGCGAAAGCGTGTTACTGAATCTTACCCTGATTCTGATAAACAAACAATCGATGGCATGCTTCTTGTTATAATCGAAAAAGTGGTTTCCGAATTGGAAAAGGGAGGGTTTGAGAATATTCTGGAAGCTTCTTCTGCAACCGGGGATTTTTTCAGTGAGGATTTGTGGAGTACGGTGTGGGAGGTGAGTAATAAGGTGTTGGATGATATGAATAAAGAAAGGAAGAAGGAGAAGATGAAGGGTTTTCTGCAATGTGAGGAAGTCAAAGAGATGTGTAGGTTCGCTGGCGAGGTTGGGATTCGTGGCGATTTGTTGCGAGAGATGAGGTTTAAGTGGGCAAGGGAGAAGATGGAGGAGCATGATTTCTATGAGGGGTTAGAAAGAATCAAAAAAGAAGCCGATGCGGTGCAGGCTGAAGAAGAAAACCAAGAGGGGATTGAGGACTCCGAGGTTGTTGGTGAGGAGAATATGAAGGATAAGGTTGTTACACTTCCTAAGAGGAAAGGGAAGATTAAGTACAAGATTTACGGGCTTGATTTATCGGATCCTAAGTGGGAACAAGTGGCTGATAGGATCCATGAGGCAGGGCAAGTTATATGGCCGGAGGAGCCTAAGCCGATTACTGGAAAATGCAAGCTTGTTACTGAGAAAATTGGGTCGTTAAAGGCTGATGATGATAACTTATTGACGCTGTTGGTTGAATGGAAGGAGCTTTTACAACCAAGCAGAGTAGATTGGATTAGTTTGCTTGACAGGTTGAAACAGAAGAATCCTCCTTTGTACTTCAAGGTGGCAGAAATGTTATTGACAGAAGATTCTTTCCAAACAAATATATCAGACTACTCTAAGCTTATTGATATATATGCTAAAGAGAGCCGGTTTGATGATGCTGAGAGTCTCCTTAAGAAGATGAAAGAAAAAGGTATACTACCAGATGCTCCAACAGCCAGTGTGTTGGTCCACATGTACAGCAAGGTAGGCAGTGTTGAACGTGCAAAAGAAGCATTTGAAACCTTGAGGAGCTATGGCTTCCAACCCGATGTAAAAGTTTACACCTCAATGATCATGGCCCATGTAACTGCTGGCAATCCTAAGGATGGTGAGGTATTGATGAGGGATATGGAGACGAGAGATATTAAACCCACAAAGGAAATATACATGGCATTGCTTCGATCTTATTCTCAGCATGGTGATGTTCTTGGAGTCAAGCGAATTTTCACAACTATGGAGTTTGCAGGATTCAAGCATACTCTGGAGACATCCACATTGCTGATTGAGGCAAATGCCCATGCAGGTGACCCTGATCAGGCAAGAAGCGACTTTGACCTCATGATGAAACTTGGGCATAAGCCAGATGATAGGTGCACTGCCGGCATGATTGCAGCTTATCAGAAGAAAAACTTATTGGACAAGGCATTAAATCTTCTTTTGGAGCTAGAGAATAATGGATTTGAGCCAGGGGTTGCCACTTATTCTGTTCTTGTGGACTGGTTGGGTGAGTTGCAGCTTGTGGAGGAGGCTGAACATCTTTTAGGTAAAATTTCTCTGCTGGGTGAGGCTCCTCCTTTAAAGGTTCAAGTTAGTCTTTGTGCTATGTATGCAAGGGCTGGTAATGAGAAAAAGGTCCTTCAAACTCTGGGCTTTCTGGAAGCTAGGAAGGATAAATTAGGACTAGCTGAATTTGAGAAGATTATTCGCAGTCTGGTCGTTGGTGGGTTTGAGCAGGATGCACGAAGAATACGCAGTATCATGGAGGCACGGGGTTTCACTATATCAAATCAGAATTCCAATTCATCAAAACAGTTAAAGATGGACCTTGCGAAACTTAGCCTTAGATCACCAAGTATGAGATAG 2154 0.4234 MFYRTLLSRQKFNKLNAFLHSHFPKSSSTFLTFPHTIHHSTSYSSSIFQSFPKYFHSTRVTQLSTNSLVPVLNSNDLGNDDDLNTHDATMNEFLSRFVWIMRKRVTESYPDSDKQTIDGMLLVIIEKVVSELEKGGFENILEASSATGDFFSEDLWSTVWEVSNKVLDDMNKERKKEKMKGFLQCEEVKEMCRFAGEVGIRGDLLREMRFKWAREKMEEHDFYEGLERIKKEADAVQAEEENQEGIEDSEVVGEENMKDKVVTLPKRKGKIKYKIYGLDLSDPKWEQVADRIHEAGQVIWPEEPKPITGKCKLVTEKIGSLKADDDNLLTLLVEWKELLQPSRVDWISLLDRLKQKNPPLYFKVAEMLLTEDSFQTNISDYSKLIDIYAKESRFDDAESLLKKMKEKGILPDAPTASVLVHMYSKVGSVERAKEAFETLRSYGFQPDVKVYTSMIMAHVTAGNPKDGEVLMRDMETRDIKPTKEIYMALLRSYSQHGDVLGVKRIFTTMEFAGFKHTLETSTLLIEANAHAGDPDQARSDFDLMMKLGHKPDDRCTAGMIAAYQKKNLLDKALNLLLELENNGFEPGVATYSVLVDWLGELQLVEEAEHLLGKISLLGEAPPLKVQVSLCAMYARAGNEKKVLQTLGFLEARKDKLGLAEFEKIIRSLVVGGFEQDARRIRSIMEARGFTISNQNSNSSKQLKMDLAKLSLRSPSMR 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0576 717 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 5, MITOCHONDRIAL 5 695 - -
Lal8g0576 717 Coils Coil 223 246 - -
Lal8g0576 717 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 552 586 IPR002885 -
Lal8g0576 717 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 517 551 IPR002885 -
Lal8g0576 717 Gene3D Tetratricopeptide repeat domain 348 510 IPR011990 GO:0005515
Lal8g0576 717 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 412 446 IPR002885 -
Lal8g0576 717 TIGRFAM PPR: pentatricopeptide repeat domain 417 448 IPR002885 -
Lal8g0576 717 TIGRFAM PPR: pentatricopeptide repeat domain 450 482 IPR002885 -
Lal8g0576 717 TIGRFAM PPR: pentatricopeptide repeat domain 381 413 IPR002885 -
Lal8g0576 717 Pfam PPR repeat family 381 424 IPR002885 -
Lal8g0576 717 Pfam PPR repeat 559 584 IPR002885 -
Lal8g0576 717 Gene3D Tetratricopeptide repeat domain 535 713 IPR011990 GO:0005515
Lal8g0576 717 Pfam Pentatricopeptide repeat domain 439 493 IPR002885 -
Lal8g0576 717 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 377 411 IPR002885 -
Lal8g0576 717 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 447 481 IPR002885 -
Lal8g0576 717 PANTHER OS07G0661900 PROTEIN 5 695 IPR044657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0576 Lal-Chr8 3997332 4002731 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0576 8 3997332 4002731 Lal8g0576 8 3997332 4002731 ECH