Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0571 ATGGATACAACTTTTACTACCTTGAATTTCAGTGCCAATCTAGTTAGTAAAGGAGTTGTTAGAAATAGAAGCAGTTTTTTCTGGGGTGAGAGTACAAGGGGAAGCTTCACTAGTAGTTTTTGTAGTATTCAACCATGCAAGAGTTCAAAAACTAGAACTTTCAACCCTGGCTTTGCATATGCTGTTTACACACCAGATGTGAAAAAAGAGTCTGTGATATTCCAGGAACCCATTTTTCAGAGTCCAAAAGCAAATCCAGACAATGTAGCTGCCATTATATTGGGTGGAGGCGCTGGAACTCGACTCTTTCCACTTACTAGCACAAGAGCCAAACCCGCTGTTCCAATTGGAGGGTGTTACAGACTAATAGATATTCCTATGAGCAATTGCATCAATAGTGGCATCCGTAAAGTATTTGTTTTAACACAATACAACTCTTTTTCCCTCAATGGCCACCTGTCTCGGACGTATAATTTCGGAAATGGTGTGAATTTTGGAGATGGTTTTGTGGAGGTGTTGGCTGCTACTCAAACTCCTGGAGAAGCAGGGAAGGAATGGTTCCAAGGGACTGCTGATGCCGTGAGGCGATTTATATGGGTTTTTGAGGATGCTAGAAATAAGAATGTTGAGCATATATTGATACTTTCGGGAGATCATCTTTGCCGAATGGACTATATGAAGTTTATGGAGCAACATATTAGGACAAATGCTGATATCACAGTTTCATGTGTACCTATGGATGACAGTAGTGCATCTGAGTATGAGCTAGTGAAAATTGATAGAAAGGGACGGGTTATGCAGTTTGCTGAAAAACCAAAGGGGTCAGATCTGAAGGCAATGCGCATTGACACTAGTCTACTAGGATTAACTGCAGAAGAAGCACAGAAATATCCTTACATTGCATCTATGGGAGTTTATATATTTAGAACTGAGACCCTTCTGAAACTATTGAGATGGAGTTGTCCTTCATGTAATGACTTTGGATCTGAAATTGTCCCATCTGCTCTGAGGGACCACAAAGTTCAAGCATATATGTTCAGGGACTATTGGGAAGATATTGGAACTATAAAATCCTTCTTTGATGCAAATCTAGCCCTGGCAGAACAGTCTCCAAAATTTGAATTCTATGATCCAAAAACACCTTTCTTCACTTCTCCGAGATTCCTACCACCTACTAGAGCAGTAAAATGCAAGATTGTGGATGCAATCATTTCTCATGGTTGCTTCTTGAGTGAGAGTCATGTTAAACATTCTATTGTTGGCGTGCGCTCACGTTTAGAGTCCGGTGTAGACCTTCAGGATACCATGATGATGGGTGCTGACTACTACCAAACTGATTCTGAGATTAAATCTCTTCTGGCCGAAGGAAAGGTTCCAGTCGGCGTTGGAGAGAATACGAAAATCAGGAAATGTATAATAGACAAGAATGCCAAGATAGGAAGGAATGTGATTATTGCAAACGGTGATGGTGTTCAAGAAGCAGACAAGCCTGAAGAAGGTTTCTACATTAGGTCAGGCATCACAGTTATAGTGAAGAATGCAACAATTAAAGATGGAACAGTTATCTGA 1569 0.406 MDTTFTTLNFSANLVSKGVVRNRSSFFWGESTRGSFTSSFCSIQPCKSSKTRTFNPGFAYAVYTPDVKKESVIFQEPIFQSPKANPDNVAAIILGGGAGTRLFPLTSTRAKPAVPIGGCYRLIDIPMSNCINSGIRKVFVLTQYNSFSLNGHLSRTYNFGNGVNFGDGFVEVLAATQTPGEAGKEWFQGTADAVRRFIWVFEDARNKNVEHILILSGDHLCRMDYMKFMEQHIRTNADITVSCVPMDDSSASEYELVKIDRKGRVMQFAEKPKGSDLKAMRIDTSLLGLTAEEAQKYPYIASMGVYIFRTETLLKLLRWSCPSCNDFGSEIVPSALRDHKVQAYMFRDYWEDIGTIKSFFDANLALAEQSPKFEFYDPKTPFFTSPRFLPPTRAVKCKIVDAIISHGCFLSESHVKHSIVGVRSRLESGVDLQDTMMMGADYYQTDSEIKSLLAEGKVPVGVGENTKIRKCIIDKNAKIGRNVIIANGDGVQEADKPEEGFYIRSGITVIVKNATIKDGTVI 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0571 522 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE LARGE SUBUNIT 3, CHLOROPLASTIC 1 522 - -
Lal8g0571 522 CDD LbH_G1P_AT_C 390 516 - -
Lal8g0571 522 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 186 194 IPR005836 GO:0005978|GO:0008878
Lal8g0571 522 ProSitePatterns ADP-glucose pyrophosphorylase signature 1. 95 114 IPR005836 GO:0005978|GO:0008878
Lal8g0571 522 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 1 522 IPR011831 GO:0005978|GO:0008878
Lal8g0571 522 CDD ADP_Glucose_PP 91 353 - -
Lal8g0571 522 SUPERFAMILY Nucleotide-diphospho-sugar transferases 88 483 IPR029044 -
Lal8g0571 522 Pfam Nucleotidyl transferase 91 368 IPR005835 GO:0009058|GO:0016779
Lal8g0571 522 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 76 387 IPR029044 -
Lal8g0571 522 SUPERFAMILY Trimeric LpxA-like enzymes 385 522 IPR011004 -
Lal8g0571 522 Gene3D Hexapeptide repeat proteins 388 522 - -
Lal8g0571 522 ProSitePatterns ADP-glucose pyrophosphorylase signature 3. 301 311 IPR005836 GO:0005978|GO:0008878
Lal8g0571 522 TIGRFAM glgC: glucose-1-phosphate adenylyltransferase 89 486 IPR011831 GO:0005978|GO:0008878
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0571 Lal-Chr8 3966726 3970295 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0571 8 3966726 3970295 Lal8g0571 8 3966726 3970295 ECH
Lal8g0571 8 3966726 3970295 Lal10g0854 10 16085608 16089576 LSH