Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0560 ATGGAAACCATCTCAGTTTCCAAGCTTCTAACACTGTACTTCTTCACTGTCTTGTTTCTGTGTACTAAGCTGATCCAATGTAGTGTCACATATGATAGGAAATCCATTGTTATCAATGGCCAAAGGAGAATCCTCATCTCTGGCTCCATTCACTATCCTAGAAGCACCCCTGAAATGTGGGAGGATCTAATTGAGAAAGCCAAACATGGAGGACTTGATGTCATTGACACTTATGTCTTCTGGAATGTTCATGAACCTTCACCTGGCAATTACAATTTTGAAGGAAGATATGATCTGGTACGGTTCATTAAGACAGTGCAGAAAGTGGGGCTCTATGTCCATCTTCGCATTGGACCTTATGTATGTGCTGAATGGAACTTTGGAGGATTTCCTGTTTGGTTGAAGTATGTTCCTGACATCAGCTTCAGAACAGATAATGGCCCTTTTAAGGCAGCAATGCAAGGTTTCACTCAGAAAATTGTCCAAATGATGAAAAATGAAAAGCTATTCCAATCTCAGGGTGGTCCAATTATTCTTTCTCAGATTGAGAATGAGTTTGGACCAGTAAGCAAGGCACTAGGTGCTGCTGGTCGTTCATACGTAAACTGGGCTGCAAAGATGGCTGTTGGATTAGGCACAGGAGTCCCCTGGGTGATGTGCAAGGAAGACGATGCGCCTGATCCGGTGATAAATGCTTGTAATGGTTTTTACTGTGATTATTTCACTCCAAATAAACCATACAAGCCAACACTATGGACTGAGGCTTGGAGTGGCTGGTTTACAGAATTTGGTGGCCCAATTGTTCAGCGCCCAGTTGAGGATCTAGCATTTGCAGTTGCTCGTTTCTTACAAAAGGGTGGCTCATATTTCAATTATTACATGTATCATGGAGGAACTAACTTCGGACGATCAGCCGGAGGTCCATTCATTACTACAAGCTATGACTATGATGCTCCAATTGATGAATATGGTTTGCTCAGGCAACCTAAGTATACTCATTTGAAGGACCTTCATAGAGCTATCAAGCAATGTGAACATGCGTTGGTTTCTTCGGATCCTACTGTTATATCATTAGGAACCTATGAACAAGCTCATGTATTCTCTTCTGGGACTGGAAAATGCGCAGCATTTTTAGCAAACTATCATTCAAATTCTTCTGCTAGAGTGACATTCAATAACAGGCACTATGACTTGCCTGCTTGGTCCATAAGCATCCTCCCTGATTGCTTAACAGATATATTCAACACCGCAAGGGTGAGGGTTGGAACGTCACAAATACAAATGGTGCCTAGCAATTCTAAGGTCTTATCATGGGAGACATATAATGAAGATATATCTTCCCTGGAGGAAAGTTCAAAGATAATAAATTCTGGACTTATAGAACAGTTAAATGCTACCAGAGACAGTAGTGATTATCTATGGTACATAACCAGTGTTGACATAAGTCCATCTGAATCGTTTCTTCGAGGAGAACACAACAAGCCCAGCATTAGTGTGAATTCTGCAGGCGATGCGGTCCATGTGTTTATTAATGGGCAGTTTTTAGGCTCAGCTTTTGGGACAAATGAACAGAGAAGTTTCACATTTAATGGCCCTGCCAATTTACGCGCCGGAACTAATAAAATAGCACTTCTCAGCGTCGCTGTTGGATTACCGAATGTTGGATTCCACTTTGAAACATGGAAGACAGGTATCATTGGTCCTGTTTTGCTCCATGGTCTTGACCATGGACAGAAAGATTTGACATGGCAGAAATGGTCATACCAGGTTGGCCTAAAAGGAGAGGCTGTGAATTTGGTGTCTCCAAATGGTGTCTCATCTGTTGATTGGTTCATAGAGTCACTAGCAACAAAAAACCAGCCACAATTGAAATGGCACAAGGCTTATTTCAATGCACCTGATGGAGTTGAACCATTGGCTTTGGACTTGGGTAGTATGGGAAAGGGTCAAGTATGGATCAATGGACAAAGCATAGGAAGATATTGGATGGTTTATGCAAAGGGTGCTTGTAATTCTTGCAACTATGCTGGGACATACCGACCCATAAAGTGCCAACTTGGTTGTGGAAATCCTTCCCAAAGATGGTATCATGTTCCAAGATCCTGGTTAAAGCCAACAAATAACTTGATGGTAGTTTTTGAGGAACTAGGAGGGAATCCTTGGAAAATATCTCTGGTAAAGAGGACAGTACATACTCAAGCTGCTAGTGAACCCAATACAAAGAACTGA 2229 0.419 METISVSKLLTLYFFTVLFLCTKLIQCSVTYDRKSIVINGQRRILISGSIHYPRSTPEMWEDLIEKAKHGGLDVIDTYVFWNVHEPSPGNYNFEGRYDLVRFIKTVQKVGLYVHLRIGPYVCAEWNFGGFPVWLKYVPDISFRTDNGPFKAAMQGFTQKIVQMMKNEKLFQSQGGPIILSQIENEFGPVSKALGAAGRSYVNWAAKMAVGLGTGVPWVMCKEDDAPDPVINACNGFYCDYFTPNKPYKPTLWTEAWSGWFTEFGGPIVQRPVEDLAFAVARFLQKGGSYFNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLLRQPKYTHLKDLHRAIKQCEHALVSSDPTVISLGTYEQAHVFSSGTGKCAAFLANYHSNSSARVTFNNRHYDLPAWSISILPDCLTDIFNTARVRVGTSQIQMVPSNSKVLSWETYNEDISSLEESSKIINSGLIEQLNATRDSSDYLWYITSVDISPSESFLRGEHNKPSISVNSAGDAVHVFINGQFLGSAFGTNEQRSFTFNGPANLRAGTNKIALLSVAVGLPNVGFHFETWKTGIIGPVLLHGLDHGQKDLTWQKWSYQVGLKGEAVNLVSPNGVSSVDWFIESLATKNQPQLKWHKAYFNAPDGVEPLALDLGSMGKGQVWINGQSIGRYWMVYAKGACNSCNYAGTYRPIKCQLGCGNPSQRWYHVPRSWLKPTNNLMVVFEELGGNPWKISLVKRTVHTQAASEPNTKN 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0560 742 Gene3D Glycosidases 22 292 - -
Lal8g0560 742 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 174 186 IPR019801 GO:0004553|GO:0005975
Lal8g0560 742 Gene3D - 605 735 - -
Lal8g0560 742 Pfam Glycosyl hydrolases family 35 35 340 IPR031330 -
Lal8g0560 742 Gene3D - 442 588 - -
Lal8g0560 742 PANTHER BETA-GALACTOSIDASE RELATED 4 735 IPR001944 GO:0004553|GO:0005975
Lal8g0560 742 Gene3D - 293 412 - -
Lal8g0560 742 SUPERFAMILY Galactose-binding domain-like 403 575 IPR008979 -
Lal8g0560 742 SUPERFAMILY Galactose-binding domain-like 584 732 IPR008979 -
Lal8g0560 742 SUPERFAMILY (Trans)glycosidases 28 345 IPR017853 -
Lal8g0560 742 PANTHER BETA-GALACTOSIDASE 4 735 - -
Lal8g0560 742 PRINTS Glycosyl hydrolase family 35 signature 39 56 IPR001944 GO:0004553|GO:0005975
Lal8g0560 742 PRINTS Glycosyl hydrolase family 35 signature 60 78 IPR001944 GO:0004553|GO:0005975
Lal8g0560 742 PRINTS Glycosyl hydrolase family 35 signature 115 134 IPR001944 GO:0004553|GO:0005975
Lal8g0560 742 PRINTS Glycosyl hydrolase family 35 signature 172 187 IPR001944 GO:0004553|GO:0005975
Lal8g0560 742 PRINTS Glycosyl hydrolase family 35 signature 251 266 IPR001944 GO:0004553|GO:0005975
Lal8g0560 742 PRINTS Glycosyl hydrolase family 35 signature 288 303 IPR001944 GO:0004553|GO:0005975
Lal8g0560 742 PRINTS Glycosyl hydrolase family 35 signature 308 324 IPR001944 GO:0004553|GO:0005975
Lal8g0560 742 PRINTS Glycosyl hydrolase family 35 signature 621 635 IPR001944 GO:0004553|GO:0005975
Lal8g0560 742 PRINTS Glycosyl hydrolase family 35 signature 648 664 IPR001944 GO:0004553|GO:0005975
Lal8g0560 742 Pfam Beta-sandwich domain in beta galactosidase 348 419 IPR041392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0560 Lal-Chr8 3878317 3884049 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0560 8 3878317 3884049 Lal16g1841 16 17484882 17493581 ECH
Lal8g0560 8 3878317 3884049 Lal8g0560 8 3878317 3884049 ECH
Lal8g0560 8 3878317 3884049 Lal10g0865 10 16170899 16178471 LSH
Lal8g0560 8 3878317 3884049 Lal21g0137 21 945645 951327 PCT
Lal21g0137 21 945645 951327 Lal8g0560 8 3878317 3884049 PCT