Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0558 ATGGTGTCTCTAATTTCCCCATCTTCTTCATTCTGCACCATTCATCTACGCGAATCTCGTTTTTTCTTATTTCCCACTCATAACAATGTCATCAAATTCCAAGATAAATGCATTTCACAAAATCACAGGTTCAAAACGGTGCGTTGCAAGGTTATTACCACCAACCCTTCTTATTCACCGTTACCAACACCTCCCTCATCGTTAACAAAGGAACCTCACAAATACTTCGATCAAGTTATCATAACCGTTCGTGCAGGAGACGGAGGCCACGGCGCGTTACTCAACACTCCAAACGAAACAACAACAACAACAACAACGAAAAATGAAAAGAAGGATAAATCGAAAGTGAAGAAGAGAAGTTCGTTCAAAAGAGATTTTGATGGGTCACTTATTCTACCAAGTGGTGGACACGGTGGTGATGTGGTTATTTATGCAGATGAGTTCAAAGACACGTTATTGGAGTTTCATAATAAGAATAGGTTCAGTGCGAAACGTGGTGGAAATGTTGATTCTAAAGGAAGTGTTTTGAATTCAATGTTGCGTAATGGACTTGCTGCTCCTACTTTGCGCATTCCTGTTCCTGTAGGCACGGTTGTGAAAAGCAAACGAGGGAAGATGTTGGCTGATCTAGCACAACCTGGTGATGAATTTCTTGTTGCTAGGGGTGGACAAGGAGGGATTAGCTTGTTACAAACACCACAGCATAAAAAGAAAAAGCTGATGGCATTGACATCTAATGTGATGAGAGATGACTCTGATAAGGTTTTAGTTCATGGTCAACCAGGGGAGGAAGCTAAGTTGGAGTTGATCCTACGAGTTGTTGCTGATGTTGGTCTAGTTGGACTTCCAAATGCTGGGAAATCAACTCTTCTCGCAGCCATTACACTTGCAAAACCTGATATTGCTGATTACCCCTTTACAACATTAATGCCAAACCTTGGACGCCTTGGTGGCGATCCGAGCTTGGGGGCAGGGATGTATTCATCTGAAGCTACACTGGCAGATTTGCCTGGTCTTATAGAAGGAGCTCACTTAGGAAAGGGTCTTGGGCGCAATTTTTTGAGACACCTCAGGCGGACTCGGGTATTGGTCCATGTTATTGATGCAGCTACTGACAACCCTGTAAATGACTACAGAACTGTCAGAGAAGAGTTGCGCATGTATAATCCTGAGTACCTTGAACGGCCATACGTTGTAGTTTTGAATAAGATTGACCTACCAGAGGCAAAGGACAGGCTTCAGTCATTGACTGAAGAAATTCTGAGAATTGGCAACGATGGTGCATCTTTTGAGCTAAAACAAAGCTCTGATGACGAACCTCAATTATTGCCCGATGATGGGGACAAGAAGGAAAGAAAACTTGAGGACTATCCGCGACCACTCTCTGTTGTTGGAGTTAGTGTCTTAAAGGGGATCAGGATAAATGAGATGTTGAAGGGGATAAGAGCGGCTTTAAGGAAGTGCACAGAGTCCAATTCTTTGAGTGTAGCACCTTGA 1497 0.4315 MVSLISPSSSFCTIHLRESRFFLFPTHNNVIKFQDKCISQNHRFKTVRCKVITTNPSYSPLPTPPSSLTKEPHKYFDQVIITVRAGDGGHGALLNTPNETTTTTTTKNEKKDKSKVKKRSSFKRDFDGSLILPSGGHGGDVVIYADEFKDTLLEFHNKNRFSAKRGGNVDSKGSVLNSMLRNGLAAPTLRIPVPVGTVVKSKRGKMLADLAQPGDEFLVARGGQGGISLLQTPQHKKKKLMALTSNVMRDDSDKVLVHGQPGEEAKLELILRVVADVGLVGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGMYSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRVLVHVIDAATDNPVNDYRTVREELRMYNPEYLERPYVVVLNKIDLPEAKDRLQSLTEEILRIGNDGASFELKQSSDDEPQLLPDDGDKKERKLEDYPRPLSVVGVSVLKGIRINEMLKGIRAALRKCTESNSLSVAP 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0558 498 MobiDBLite consensus disorder prediction 438 454 - -
Lal8g0558 498 ProSiteProfiles Obg domain profile. 73 274 IPR006169 -
Lal8g0558 498 Pfam 50S ribosome-binding GTPase 276 403 IPR006073 GO:0005525
Lal8g0558 498 Gene3D GTP1/OBG domain 74 273 IPR036726 -
Lal8g0558 498 PANTHER GTP-BINDING PROTEIN OBGC2-RELATED 47 492 - -
Lal8g0558 498 Gene3D - 274 494 IPR027417 -
Lal8g0558 498 ProSitePatterns GTP1/OBG family signature. 335 348 IPR006074 GO:0005525
Lal8g0558 498 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 275 486 IPR031167 GO:0005525
Lal8g0558 498 MobiDBLite consensus disorder prediction 431 454 - -
Lal8g0558 498 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 47 492 IPR045086 GO:0003924|GO:0005525
Lal8g0558 498 SUPERFAMILY Obg GTP-binding protein N-terminal domain 134 235 IPR036726 -
Lal8g0558 498 TIGRFAM small_GTP: small GTP-binding protein domain 276 418 IPR005225 GO:0005525
Lal8g0558 498 Pfam GTP1/OBG 134 272 IPR006169 -
Lal8g0558 498 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 276 486 IPR027417 -
Lal8g0558 498 MobiDBLite consensus disorder prediction 90 119 - -
Lal8g0558 498 CDD Obg 275 420 IPR031167 GO:0005525
Lal8g0558 498 PRINTS GTP1/OBG GTP-binding protein family signature 277 297 IPR006073 GO:0005525
Lal8g0558 498 PRINTS GTP1/OBG GTP-binding protein family signature 298 316 IPR006073 GO:0005525
Lal8g0558 498 PRINTS GTP1/OBG GTP-binding protein family signature 333 348 IPR006073 GO:0005525
Lal8g0558 498 PRINTS GTP1/OBG GTP-binding protein family signature 350 368 IPR006073 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0558 Lal-Chr8 3869909 3875109 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0558 8 3869909 3875109 Lal8g0558 8 3869909 3875109 ECH