Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0554 ATGGCTGGTTTCTTCTCTCTAGGTGGAAGAGGAGGAGGTCCACAAAACAAGGAAGACGAACAAAAACGACAAGTTAATAATAACACTCAATTCTTGTTCAGGAACGAAGAGATCTACAACAGAGGGTTCCAGATATGGCCACAGTATAACAGCAGCAGCAGCAACAGCAACAACAACAACAACTATTACTCGTTCGGAGTGGGACCTAGTAGAAGAAACTCATCATCATCGAATAACGTGGTGGACAACGTTGTTTCAGTATCTGATGAGAGTACTCGATTTGGTTTCAGTGTGATGAGGGCATCTGGTTCATCTGGTTTTGGTGGTGAAATGAATTGTCAGGATTGTGGGAATCAGGCTAAGAAAGACTGTCCTCACCTGAGATGCAGAACTTGTTGTAAGAGTCGAGGGTTTCAGTGTCAAACCCATGTTAAGAGCACTTGGATCCCTGCTGCTAAACGCCGTGAACGGCACCAGCAACATCAGAATGAACCACAACAACACCCACAGTTTTGGGGAGAGGATCATTCTTCTAGAAGAAATAGAGAAAATCAAGGTGTTGCTGATCCTCTAGCTTCTGCAGCTTCTCTACCTCTCACTGCAACAGTTACTGAATTGCAACTTGTTCTTCCTATATACTATTCTACTAAAAAGCAAAATGAAGAGAAACATAGAAGCAATGTAGGGTTGGAGCTGGGACAATATCCACCTGAATTAAACTCTTCAGCTGTGTTCCGATGTGTAAAAGTGAGCCCAATAGACGCACCCGATGAAAGGTACGCGTACCAAACAGCAGTGAACATAGGAGGACATGTTTTCAAGGGAATTCTCTATGATCAAGGACCAGATTGTCCTTACACTAATGCTACAACAGGAGCTGGTGAGGGTTCCTCACTCGGCGGCGGCGGTGGTGATGCTCAGCAACTCACTCTCACCACCGCCACAACCACCGGTAACCCATTCTACCAGCCTCCATTCAGTGCTTTCATGGCTGGTACGCAATTCTTCCCACCAAGATCCTAA 1023 0.4536 MAGFFSLGGRGGGPQNKEDEQKRQVNNNTQFLFRNEEIYNRGFQIWPQYNSSSSNSNNNNNYYSFGVGPSRRNSSSSNNVVDNVVSVSDESTRFGFSVMRASGSSGFGGEMNCQDCGNQAKKDCPHLRCRTCCKSRGFQCQTHVKSTWIPAAKRRERHQQHQNEPQQHPQFWGEDHSSRRNRENQGVADPLASAASLPLTATVTELQLVLPIYYSTKKQNEEKHRSNVGLELGQYPPELNSSAVFRCVKVSPIDAPDERYAYQTAVNIGGHVFKGILYDQGPDCPYTNATTGAGEGSSLGGGGGDAQQLTLTTATTTGNPFYQPPFSAFMAGTQFFPPRS 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0554 340 MobiDBLite consensus disorder prediction 1 24 - -
Lal8g0554 340 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 338 IPR007818 GO:0003700|GO:0006355
Lal8g0554 340 Pfam Domain of unknown function (DUF702) 110 283 - -
Lal8g0554 340 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 235 282 IPR006511 -
Lal8g0554 340 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 112 154 IPR006510 -
Lal8g0554 340 MobiDBLite consensus disorder prediction 153 186 - -
Lal8g0554 340 PANTHER PROTEIN SHI RELATED SEQUENCE 7 1 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0554 Lal-Chr8 3848411 3850205 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Lal8g0554 DUF702 1.2e-61 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0554 8 3848411 3850205 Lal1g0204 1 1221889 1223522 ECH
Lal8g0554 8 3848411 3850205 Lal8g0554 8 3848411 3850205 ECH
Lal8g0554 8 3848411 3850205 Lal25g0538 25 3905058 3907407 LSH
Lal8g0554 8 3848411 3850205 Lal10g0869 10 16198212 16199850 LSH
Lal8g0554 8 3848411 3850205 Lal21g0130 21 904959 907545 PCT
Lal8g0554 8 3848411 3850205 Lal4g0084 4 507223 509833 PCT
Lal21g0130 21 904959 907545 Lal8g0554 8 3848411 3850205 PCT
Lal4g0084 4 507223 509833 Lal8g0554 8 3848411 3850205 PCT