Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0550 ATGGATGGAAAAGATAAGAGGATTAGGGCGAAGAAGAAGAGATCGAAGCTGGTGGAAATTGGTTTTGATTTGGATGATAATGTAACCATTGGCTCTATGTTTAAGCTAAAGAAGCCGAAGAAGAAGGTTAATTTGGTGCCGGAAGGGTCTTGTGGTGATGGAGGCAATAATGGTGAGGTTGTTGGGAAAGATTCAGTTGCTGCAGAAAAGGATTTCGGAGGTATGGATGATACCTTGGCTAGTTTCAGGAAGAAGTTGAAGGATCTAAAGAGAGATCGGGGATCTGAAGCCAGTGGAGGAAGAAGTTCCACTTTGAATGTAGGGCTGGAGTCTTCTGATAGATCTCTGAATGTTTCTGTTGAGGGAATTGAGGGTCATGGTTTGTCTGGTGACGATTTCGCTGCTCAGGAATCAAGGGGCACCTTAAATAATGAGAAAGGGGTATGTTTGTTGCTTGGTGATGGCCTGGAGCACTCTTATGGTGAAAATATGGAAGACTCTTTGTCAGTGTTTGTCCGAAAGGCACAATCTAATTTGATTAAGAAATCACGGGCTTCTTCAAGTTCAAAGAAAAGAAGACGGATTGAGAATGTGGATAATGGCCTGAGATCTGACTCTGAACGTGTTCCTGAAATTGTAGATTCTGTGGCTGAATTTAGATCTAGACCTGCTTCTGCCTTGGGATCGGTGAGGAAAGATCTGACATGTTCCGGTTCTGTGTCACAATCATCTGCTCTGGGTCAATTTTCTTCCATGTCTGTAATTGATAAACAAAAGTATGACTGTCATCAAGCGGATATTGCTGTGGGCATTTGCAATTCAAACGTTCCAGGTGAACCATTAGTTGATCATTGTCTCTCAACTAATGTCTGCATAGGGGATAGACAACTTTTAAATCGGTGTTCTGCCAGGTTAGATGGTATTGAAATAATTGATACCGTGCTTCTTTCAAAAGTTGGGGAAGTGATACATGAATGTACTGATAGTGAGTTCAAGAATAGATCGACCGGTGAACTATCACAAGGGTGTAATGATGCTTCAAAACACGGTGTTTCTACTTCTATTGAGAAAGAAAATTCCTTACCTTCTCATGACACTGAGCCCTTGATTAAATCTACTGAAAGTATATTGAGTGAGAATAATTTTACGGTTTCTGGAAACTTTTTCCAGGAATCATCAGGCAATGAAGCTCTAAAGCTTTCTGGATCCCATGTGGAGGAAGATGGAGGTTTAAAAACTGAAACCGAGTTTATTTCTGTTAGAAATTTCTGTGATTATAGTAGTTTAGATACAAAGGCTGAAGTGAAATATTTTTCTTCAGGTGCTTCAATTGAAAAAAATTATGTAATAGCTGGTGGTAGTTTATCTCCTATGATGTCTAATGAAGCCGATGAATCTGAATTGGCTAATGAGTCAAATCACCAAGAGAAACCTTCAGAAATATGTAATATTCCAAAAGACTCTACTGCTTCAGTTTTGGAATTTTCAGATCCAGTTCAATCCAATGGATCCTCCCTTCCATCTGCAATTCCAGATGAAAATGAGAATTATGCAGAATGCCATGCCTCTCTGTCTGATTTTGTCAACAAAGATGGTAAGATATCAGCTGTTCCACGTGCGGTCCGAAAGGCCAAAATGCTTAAGCAAGGAGACATGACTTATGAGGGGGATGCTGATTGGGAGATTTTAATAAATGATCAACCTCTTCATGAAAGCCAAGTTGTTGTAGATAATGACCACACTCTTAGAACAAGGGCGAAGCATGATTCCTCTTTTAATGTTGCCGATGACTCTGAAAGTGTTGCAGTAGTAGCTGTATCAGCCGGACTCAAAGCCCATGCAGCTAGTCCAATTGAGAAAATAAAATTTAAGGAGATCTTGAAGCGGAAAGGTGGTCTCAAGGAATACTTGGATTGCAGAAATAAGATCTTAAGTATTTGGAGCAGAGATATTACACGCATTTTGCCTCTTGCTGAATGTGGACTTAGTGATATCCATTCCGACGAGGAAGGTCCTCATTCTTTTCTTATCAGGGAAGTCTATACATTTCTGGATCAATGTGGTTTCATAAATGTTGGAATTGCATCTCAAAAGGAGATTGTTGGAAATAGTGCAAGTAATTGCTGTAAACTTGAAAAAGAAAACGGTTTTGAGGAAAGTTCGACAGCTTCGGTGGCTGACTCTGAAGATGGAGTTTCCTTTATTGTTGGTCAGACTAAAATGTCAGATACTTCCATGGAGATTAACAATGGTCTAACAATGGATTTCAAAGACCTGAAAACAGAAACTGCAGAAGACAGAAGGCTTTTCAATGCAGCAATGATGAGTATATCAAACATGAGACAACACGAAGAAGGAAAATATTATGACTACCAGGAAAATGGTGGGAGTCAGGACCAATATACTACAGGGCAAAGCAATGAATCCATCTGTGTTAAATCCACATTAGGTGATCAGATAGATAATCTTCTGCAGTCTGATTCAGAGGCTAGAAAGAGAGTGATTGTGATTGGAGCTGGTCCTGCTGGGCTAACTGCTGCTCGTCATTTGAAACGTCAGGGATTTCCTGTAACTGTACTTGAGGCTAGGAATAGGATTGGAGGTCGTGTATTTACAGATCACTCATCTCTTTCCGTCCCTGTGGATCTCGGTGCCAGCATTATCACTGGTGTTGAGGCTGATGTGGCCACTGAGAGAAGACCAGATCCTTCCTCATTAGTTTGTGCTCAATTGGGCCTTGAATTGACAGTGCTAAACAGTGATTGCCCTCTTTACGACACAGTGTCAGGACAAAAGGTTCCACCAGATATGGATGAAGCACTGGAAGCTGAATACAATACTGTTCTTGATGACATGGAATTGCTTGTTGCTCAGAAAGGTGAACAGGCAATGAGAATGTCTCTTGAAGATGGTTTAGAATATGCCCTTAAGATTCGGCGTTTGGCACGCTCTGGAAGTAGTGAAGAAACTGAAAAAGATTATTCTGGTTATAGTCCATTTGATTCTAGAAGAGACTGTACTGTGAAGAAAAAAATTGACGAGGAGATTTTGAGTCCTCTGGAGAGGAGGGTTATGGATTGGCACTTTGCTCATTTGGAGTATGGTTGTGCTGCTTTGCTTACAGAAGTTTCTCTTCCCTATTGGAATCAAGATGATGTCTATGGAGGATTTGGGGGAGCTCATTGTATGATTAAAGGGGGTTACAGCACTGTTGTTGAGTCTTTAGGAGAAGGGCTTGCTGTCCACTTGAACCATGTCGTAACAAATGTGTCTTATGGCATCAAGGAATCTGGCCAGAATAATAAAGTCAAAGTTTCTACGTCAAATGGGAACGACTTCTTTGGAGATGCTGTCCTCGTCACTGTTCCACTAGGGTGTTTGAAGGCTGAAACTATACAATTCTCCCCTCCTTTGCCGCCGTGGAAATATTCTGCTGTTCAGCGTCTTGGCTTTGGAGTTCTCAATAAAGTGATTTTGGAATTTCCTTGTGTGTTTTGGGATGATGCTGTGGATTACTTTGGAGCGACAGCTGAGGAAAGAGGCAAAAGAGGTCACTGTTTTATGTTCTGGAATGTCAGGAAAACAGTTGGGGCTCCTGTCCTTATAGCATTAGTGGTCGGTAAGGCAGCCATAGATGGTCAGAGTTTGAGCTCTACTGATCATGTCAACCATGCATTGAAAGTTCTTCGTAAACTTTTTGGGGAGGCTTCAGTACCTGATCCTGTTGGACATGTCGTGACTGATTGGGGTAGGGATCCTTTTAGCTATGGTGCTTATTCTTATGTTGCTATTGGAGCGTCAGGAGAAGACTATGATATATTAGGGAGGCCAGTTGATAATCACTTGTTTTTTGCTGGTGAAGCGACCTGCAAAGAGCATCCTGATACAGTTGGTGGTGCAATGATGAGTGGACTACGAGAGGCTGTTCGCATAATTGACATATTGAGCACTGGAAATGATTACACTGCCGAAGTGGAGGCAATGGAAGCTGCCTCGAGACGGTTAGATACCGAAAATGAAGTTAGGGATATAACAAAGAGACTCAGCACAGTAGAGCTTTCTAACCTATTCTACAAGAACTCTTTGGATGGTGCTCAAATTTTAACCCGGGAAGCTTTACTAAGAGAAATGTTCTTTAATGCGAAAACCAATGCTGGGCGCTTGCATGTGGCCAAAGAATTGCTATGCCTTCCTGTTGGAAACTTGAAGTCCTTTGCTGGGAGTAAAGAAGGGCTAGCTATTCTCAACTCGTGGATACTGGACTCAATGGGGAAGGATGGTACCCAACTGTTGCGGCACTGTGTGCGTCTTCTTGTGCGTGTTTCAACTGATCTACTTGCTGTACGCATGTCAGGAATAGGGAAAACAGTGAAGGAAAAAGTTTGTGTGCATACCAGCCGCGACATTCGTGCTATAGCAAGCCAGTTGGTCAATGTATGGCTTGAAGTATTTCGCAAGGGAAAAAAAGCTTCTAATGGGGGATTGAAGTTGTCAAGACAAGCAACTGCTGTAGATTTACTAAGGAGAAAATATTTAAAAGATTCAGCCTCAGGAAAGCCACCTCTGGGTACACATCATGGTAGCTTTGAGAATAAAGGAACACAACAAGCAACAACCATTTCAAGGCATGAGGCCAATTCTTCCAGATCCCAAGGTTCAATTGGCAAATTACTCACAGAGAAGGAGGATAACTGCTATGTTATTTCTGAAGAGGAACGGGCTGCTATAGCTGCTGCAGAAGCTGCCCGTGCTGAAGCTCATGCTGCTGCTGAGGCATATGCTGCTGCAGAAGCCAGGCGCAATAAGTTGTTACAGCTTCCTAAGATACCCTCATTCCAGAAATTTGCTTCAAAAAATGATGAATGTGATAGCAGAAAAAAGTGGTCTGGTGCTTTGGGAAGACAAGATTGTATTTCAGAGATTGATTCGAGGAATTGTAGAGTTAGGGATTGGTCTGTTGATTTTTCCGCTGCTTGTGTTAACCTTGATAATTCCAGAATGGCAGTTGATAATCTTTCACAGAGGAGTCACTCAAATGAGATTGCCAGCCATTTGAATTTCAGAGAGCACTCAGGAGAAAGTGTCGCTGTGGACAGCAGTATATATACAAAAGCTTGGATTGACACAGGTGGTGGTGTGGGAATAAAAGATTCTGATGCCATAGACAGATGGCAATCTCAAGCAGCTGCAGCTGATTCTTATTTTTCAAATCCAAGCATAAATTTGAAGGACGAGGAAGATTCAAATGCTTGTTCAAGGTTACCCATCTGGAAGCATGATGGTATGGCAAATGAGAGTTCTATTTCACAGATTACTGTAAATAAAGAAGCCTTGAAAAGTCATTCCCGTGGAGCAGATCATATTAAACAGGCTGTTGTGGATTATGTTGGTTCACTACTTATGCCCCTTTATAAAGCAAGGAAACTAGACAAGGATGGCTACAAGGCTATAATGAAGAAAAGTGCAACGAAGGTCATGGAGAAAGCCACAGATAAAGAAAAAGCTATGACCGTTGACGAGTTTCTAGATTTTAAGCGAAAGACTAAGATTCGCTCCTTTGTGGACACATTGATTGAGAGACACATGGCAATGAAACCAGATATGAAATCTTAA 5613 0.4164 MDGKDKRIRAKKKRSKLVEIGFDLDDNVTIGSMFKLKKPKKKVNLVPEGSCGDGGNNGEVVGKDSVAAEKDFGGMDDTLASFRKKLKDLKRDRGSEASGGRSSTLNVGLESSDRSLNVSVEGIEGHGLSGDDFAAQESRGTLNNEKGVCLLLGDGLEHSYGENMEDSLSVFVRKAQSNLIKKSRASSSSKKRRRIENVDNGLRSDSERVPEIVDSVAEFRSRPASALGSVRKDLTCSGSVSQSSALGQFSSMSVIDKQKYDCHQADIAVGICNSNVPGEPLVDHCLSTNVCIGDRQLLNRCSARLDGIEIIDTVLLSKVGEVIHECTDSEFKNRSTGELSQGCNDASKHGVSTSIEKENSLPSHDTEPLIKSTESILSENNFTVSGNFFQESSGNEALKLSGSHVEEDGGLKTETEFISVRNFCDYSSLDTKAEVKYFSSGASIEKNYVIAGGSLSPMMSNEADESELANESNHQEKPSEICNIPKDSTASVLEFSDPVQSNGSSLPSAIPDENENYAECHASLSDFVNKDGKISAVPRAVRKAKMLKQGDMTYEGDADWEILINDQPLHESQVVVDNDHTLRTRAKHDSSFNVADDSESVAVVAVSAGLKAHAASPIEKIKFKEILKRKGGLKEYLDCRNKILSIWSRDITRILPLAECGLSDIHSDEEGPHSFLIREVYTFLDQCGFINVGIASQKEIVGNSASNCCKLEKENGFEESSTASVADSEDGVSFIVGQTKMSDTSMEINNGLTMDFKDLKTETAEDRRLFNAAMMSISNMRQHEEGKYYDYQENGGSQDQYTTGQSNESICVKSTLGDQIDNLLQSDSEARKRVIVIGAGPAGLTAARHLKRQGFPVTVLEARNRIGGRVFTDHSSLSVPVDLGASIITGVEADVATERRPDPSSLVCAQLGLELTVLNSDCPLYDTVSGQKVPPDMDEALEAEYNTVLDDMELLVAQKGEQAMRMSLEDGLEYALKIRRLARSGSSEETEKDYSGYSPFDSRRDCTVKKKIDEEILSPLERRVMDWHFAHLEYGCAALLTEVSLPYWNQDDVYGGFGGAHCMIKGGYSTVVESLGEGLAVHLNHVVTNVSYGIKESGQNNKVKVSTSNGNDFFGDAVLVTVPLGCLKAETIQFSPPLPPWKYSAVQRLGFGVLNKVILEFPCVFWDDAVDYFGATAEERGKRGHCFMFWNVRKTVGAPVLIALVVGKAAIDGQSLSSTDHVNHALKVLRKLFGEASVPDPVGHVVTDWGRDPFSYGAYSYVAIGASGEDYDILGRPVDNHLFFAGEATCKEHPDTVGGAMMSGLREAVRIIDILSTGNDYTAEVEAMEAASRRLDTENEVRDITKRLSTVELSNLFYKNSLDGAQILTREALLREMFFNAKTNAGRLHVAKELLCLPVGNLKSFAGSKEGLAILNSWILDSMGKDGTQLLRHCVRLLVRVSTDLLAVRMSGIGKTVKEKVCVHTSRDIRAIASQLVNVWLEVFRKGKKASNGGLKLSRQATAVDLLRRKYLKDSASGKPPLGTHHGSFENKGTQQATTISRHEANSSRSQGSIGKLLTEKEDNCYVISEEERAAIAAAEAARAEAHAAAEAYAAAEARRNKLLQLPKIPSFQKFASKNDECDSRKKWSGALGRQDCISEIDSRNCRVRDWSVDFSAACVNLDNSRMAVDNLSQRSHSNEIASHLNFREHSGESVAVDSSIYTKAWIDTGGGVGIKDSDAIDRWQSQAAAADSYFSNPSINLKDEEDSNACSRLPIWKHDGMANESSISQITVNKEALKSHSRGADHIKQAVVDYVGSLLMPLYKARKLDKDGYKAIMKKSATKVMEKATDKEKAMTVDEFLDFKRKTKIRSFVDTLIERHMAMKPDMKS 1870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0550 1870 MobiDBLite consensus disorder prediction 460 482 - -
Lal8g0550 1870 MobiDBLite consensus disorder prediction 1528 1554 - -
Lal8g0550 1870 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1409 1492 IPR035441 -
Lal8g0550 1870 PANTHER LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 531 1866 - -
Lal8g0550 1870 MobiDBLite consensus disorder prediction 1514 1554 - -
Lal8g0550 1870 Coils Coil 1579 1599 - -
Lal8g0550 1870 PRINTS Adrenodoxin reductase family signature 833 855 - -
Lal8g0550 1870 PRINTS Adrenodoxin reductase family signature 856 869 - -
Lal8g0550 1870 Gene3D - 600 703 IPR036388 -
Lal8g0550 1870 Gene3D - 940 1267 - -
Lal8g0550 1870 PANTHER FLAVIN MONOAMINE OXIDASE 531 1866 - -
Lal8g0550 1870 Gene3D - 834 1310 IPR036188 -
Lal8g0550 1870 SUPERFAMILY Homeodomain-like 599 696 IPR009057 -
Lal8g0550 1870 SUPERFAMILY FAD/NAD(P)-binding domain 831 1314 IPR036188 -
Lal8g0550 1870 MobiDBLite consensus disorder prediction 182 202 - -
Lal8g0550 1870 Pfam Flavin containing amine oxidoreductase 842 1312 IPR002937 GO:0016491
Lal8g0550 1870 ProSiteProfiles SWIRM domain profile. 601 701 IPR007526 GO:0005515
Lal8g0550 1870 SUPERFAMILY FAD-linked reductases, C-terminal domain 1150 1261 - -
Lal8g0550 1870 Pfam SWIRM domain 612 691 IPR007526 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0550 Lal-Chr8 3801699 3816648 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI or SNF-SWI3 Lal8g0550 Amino_oxidase 6.1e-105 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0550 8 3801699 3816648 Lal8g0550 8 3801699 3816648 ECH
Lal8g0550 8 3801699 3816648 Lal10g0873 10 16232094 16244227 LSH