Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0549 ATGACTACTTCCCTTTTTCTCTTTCCAATTCTCCTTGCTGCATTAGCATTGCCACTACAGAAAAGCATAGGAATAGTTGCAATGCACATGCAACTATTACACAATGACCGTGTTGTTATTTATGACCGCACAGATTTCGGGTTCTCTAATTTATCTTTACCTAATGGAAGGTGCCGCAAAAACGAGAAAGAGCTTGCTGTGAAAACGGACTGCACGGCACACTCTGTTGAATACGACGTCGTATCGAATAGTTTCCGCGCGTTGTTTATCCAAACCGATGTTTGGTGCTCCTCTGGTTCAGTTTCACCTAATGGGACATTGGTTCAGACCGGTGGTTTCAATGATGGAGAACGTAAAGTTAGGACATATAGTCCTTGTTCCACATGTGACTGGCAAGAACTTGAAAATGGTCTCGTTGCACGAAGATGGTACGCCACCAATCACAAGCTACCGGACGGTGGGCAAATAATAATCGGCGGAAGAAGACAATTCAACTACGAGTTTTACCCCAAAACCGAAGCCTCAGCAAAAAACACTTACAGTTTACCATTTTTGGTTCAAACCAATGAACCTAGAATTGAAAACAACCTCTACCCTTTTGTTTTCCTCAACGTGGATGGCAATCTTTTCATCTTCGCCAACAACAAAGCAATCTTATTCAACTATACCAATAACATTGTCGTCAAAACTTTCCCACAGATTCCAGGTGGTGATCCCAGATCTTATCCCAGTTCTGGTTCCGCTGTGTTATTACCATTAAAACATTTGCAAGCTGCAGTTATAGAAGCTGAGGTTTTGGTTTGTGGTGGAGCTCCAAAAGGGTCTTTTGAACAAGCATCAAAGGGTCATTTTATTGAAGCGTTGAATACTTGTGCTCGGGTTAAAGTAACTGATCCTAACCCAAATTGGGTTATGGAGACAATGCCTGGTGGTAGAGTTATGAGTGATATGGTGATGCTTCCTAATGGTAATGTTTTGATTGTTAATGGCGCAGGTTCGGGTACTGCAGGATGGAGATATGGGCGGAACCCTGTTTTGAACCCGTTTCTATATAAAACAAATAGTCCACTTGGGTCACGGTTTGAGTTGCAAAATGCATCTACCATTCCTAGAATGTACCATTCTACAGCTGTTTTGGTTCGCGATGGAAGGGTACTAGTTGCTGGAAGCAATCCCAACGTGTATTATAATTTCACAAACGTGATGTTTCCAACAGAGCTAAGTGTAGAAGCCTTTTCTCCTTCATATTTAGAACCTGGCTTTGATAATGTGCGTCCGAGAATAGTGTCTCCTGCTTCACAATCTCAAATTATGTATGGTCAGAAGTTGGAGGTAAAATTTAATGTGAAAGGAGCAGTGTCTCAAAATTTAGTGTTGGTGACTATGTTATCACCACCTTTTACCACACACTCTTATTCAATGAATCAGAGGATGTTGATGTTGGAGCCAAAGAGTGTGAAAAATGTGAATGGAACAACGTACCAAGTTGAAGTCACCACACCTGGTTCACCTATTCTTGCACCACCAGGTTTCTATCTACTATTTGTGGTACACCAAGACATTCCTAGCGAGGGTATTTGGGTCCAAATACAGTGA 1596 0.4179 MTTSLFLFPILLAALALPLQKSIGIVAMHMQLLHNDRVVIYDRTDFGFSNLSLPNGRCRKNEKELAVKTDCTAHSVEYDVVSNSFRALFIQTDVWCSSGSVSPNGTLVQTGGFNDGERKVRTYSPCSTCDWQELENGLVARRWYATNHKLPDGGQIIIGGRRQFNYEFYPKTEASAKNTYSLPFLVQTNEPRIENNLYPFVFLNVDGNLFIFANNKAILFNYTNNIVVKTFPQIPGGDPRSYPSSGSAVLLPLKHLQAAVIEAEVLVCGGAPKGSFEQASKGHFIEALNTCARVKVTDPNPNWVMETMPGGRVMSDMVMLPNGNVLIVNGAGSGTAGWRYGRNPVLNPFLYKTNSPLGSRFELQNASTIPRMYHSTAVLVRDGRVLVAGSNPNVYYNFTNVMFPTELSVEAFSPSYLEPGFDNVRPRIVSPASQSQIMYGQKLEVKFNVKGAVSQNLVLVTMLSPPFTTHSYSMNQRMLMLEPKSVKNVNGTTYQVEVTTPGSPILAPPGFYLLFVVHQDIPSEGIWVQIQ 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0549 531 SUPERFAMILY Galactose oxidase, central domain 76 418 IPR011043 -
Lal8g0549 531 PANTHER SECRETED PROTEIN-RELATED 19 531 - -
Lal8g0549 531 Pfam Galactose oxidase-like, Early set domain 425 530 IPR015202 -
Lal8g0549 531 CDD E_set_GO_C 420 530 IPR015202 -
Lal8g0549 531 Gene3D Immunoglobulins 424 531 IPR013783 -
Lal8g0549 531 Pfam Glyoxal oxidase N-terminus 28 270 IPR009880 -
Lal8g0549 531 SUPERFAMILY E set domains 421 530 IPR014756 -
Lal8g0549 531 Gene3D - 18 420 IPR037293 -
Lal8g0549 531 PANTHER OXIDASE, PUTATIVE, EXPRESSED-RELATED 19 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0549 Lal-Chr8 3792892 3798082 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0549 8 3792892 3798082 Lal8g0549 8 3792892 3798082 ECH
Lal8g0549 8 3792892 3798082 Lal17g0068 17 400265 401902 PCT
Lal8g0549 8 3792892 3798082 Lal21g0126 21 856499 858532 PCT
Lal8g0549 8 3792892 3798082 Lal4g0080 4 473023 474657 PCT