Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0548 ATGGAAGATGATCAAAAAACTAGTTGTGATGTATTTGGGACACCCTCAGTAGCAGTTTCTAGACAAACAAACCGTTTTAATGCTCTCAATCAAATGGGTATTCCACCCTCTCACCCTAATACTAATATTTCGCCTTCAAGTTCAAACCTTTATCCCCAATTTATGGCCTCACAACCCCAGAGATTGCGTTCTCCGAATCCGAACCATGGGACAGGGTCATCATCCCATTCTAGGTCTTTGTCTCAACCCTCATTTTTTTCTTTGGATTCCTTGCCCCCTTTGAGTCCTTCGCCTTTTCAACCATCAACCGCTGCAACTACATTTGTTGAATCAATTGCAGCAAATGTGTCTATAGAGGAAAGCTTGTGTAATGCGCCTTCTGTGCCTGTTAACCGCGGTCATCTTGTTCAGCTTGGTCATAGTCTTCCTCCTCGTAAGGGACACAGGCGTTCGAGCAGTGATTCTCCTTTAGGAATCTCTGATTATATTCAGTCTTTTCCTCAGTTTCTTTCATCTGGTGCTTGGAATGATCATGACAATTCGGTTTCAAGAGGAGAAAGCTCGGGTTTTGAGAAGGAGAAGAAACCGGTTCAGTTAGTCTTAAAGGTGCCGAATAAGGATGTGGACCGTGTTGATGGCTTTAGTGGAGAAATAGGGAATGCGAGGAAAGAGGATTCACTGGATGATTTATTTAGTGCATACATGAATTTGGACAACATTAATAGTATGGGGTTTTCAATGGAAGATAAGGATATGGATAGCAAAACAAGTGGTTCCAAGACAGTTGAAAGCAGTGACAATGAAGTTGAGAGCCGTGCTAAGGGTAAAACCACCGGTGCTCGGGGAGCCAGTTCAAGCTGTTCTGAAGAACGGAAGGAAGGAGTGAAGAGGAGTTTGAATGGAGATATCGCACCTGGTGCCCGGCACCGGAGAAGTTTTTCATTGGATAGTTCCATTGGAAATTTTTGTATTGAAGATGGATCACCTAAGCTTCCTCCTTTGCAAAATCGAGTTGGCCAACATTCGCCTAGCAATTCAATAGACGGTAAAACATCTGAAACCAGCATGGAGTTTGGAAACAGCGAGTTCAGCTCCGAGGAGCTAAAGAAAATAATGGAAAATGATAAGCTTGCTGAAATTGCGATGTCTGATCCCAAGCGTGCAAAAAGGATTTTGGCTAATCGTCTATCAGCTGCACGTTCAAAAGAGCGGAAGACGCGGTACATTTCTGAATTGGAGCACAAGGTGCAAACTCTTCAGGCAGAGACAACCACATTGTCTACCGAGTTTACCAAATTACAGATGGATACTGCAGAGATTAAAAGTCAGAATAACGAGTACAAATTGAGGCTTCATGCCTTGGAACAACAGTCTCAACTGAAAGATGCTCTGAACGAGACTTTGGATGCTGAAGTCCGCCGTTTAAGGCGTACTGTTGCTGAACTTGGTGGGGAGTCCCTCCTCTCAAGTCGCATGGCTCAACAGCTTGCTATTAACCAACAAATGTTCCAGTTACAGCAGCAACAGCAGGCCAATCAGGTTAGACAATTTCAACAGCAGAACAGCCATCCTCAGCAAGAGACACAATCTCAGTTGCAGCCACAGCAGATTCAGCGCAATACTGAATTGCAATCCCAGAGACAGAATGGCAAAGCTACCGCTTACTGA 1668 0.4418 MEDDQKTSCDVFGTPSVAVSRQTNRFNALNQMGIPPSHPNTNISPSSSNLYPQFMASQPQRLRSPNPNHGTGSSSHSRSLSQPSFFSLDSLPPLSPSPFQPSTAATTFVESIAANVSIEESLCNAPSVPVNRGHLVQLGHSLPPRKGHRRSSSDSPLGISDYIQSFPQFLSSGAWNDHDNSVSRGESSGFEKEKKPVQLVLKVPNKDVDRVDGFSGEIGNARKEDSLDDLFSAYMNLDNINSMGFSMEDKDMDSKTSGSKTVESSDNEVESRAKGKTTGARGASSSCSEERKEGVKRSLNGDIAPGARHRRSFSLDSSIGNFCIEDGSPKLPPLQNRVGQHSPSNSIDGKTSETSMEFGNSEFSSEELKKIMENDKLAEIAMSDPKRAKRILANRLSAARSKERKTRYISELEHKVQTLQAETTTLSTEFTKLQMDTAEIKSQNNEYKLRLHALEQQSQLKDALNETLDAEVRRLRRTVAELGGESLLSSRMAQQLAINQQMFQLQQQQQANQVRQFQQQNSHPQQETQSQLQPQQIQRNTELQSQRQNGKATAY 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0548 555 Coils Coil 402 429 - -
Lal8g0548 555 MobiDBLite consensus disorder prediction 514 555 - -
Lal8g0548 555 MobiDBLite consensus disorder prediction 337 362 - -
Lal8g0548 555 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 58 555 - -
Lal8g0548 555 PANTHER BZIP TRANSCRIPTION FACTOR 58 555 - -
Lal8g0548 555 CDD bZIP_plant_RF2 387 438 IPR044759 GO:0003700|GO:0006355
Lal8g0548 555 Gene3D - 385 438 - -
Lal8g0548 555 MobiDBLite consensus disorder prediction 28 87 - -
Lal8g0548 555 SMART brlzneu 382 446 IPR004827 GO:0003700|GO:0006355
Lal8g0548 555 Pfam bZIP transcription factor 386 444 IPR004827 GO:0003700|GO:0006355
Lal8g0548 555 MobiDBLite consensus disorder prediction 138 157 - -
Lal8g0548 555 Coils Coil 437 485 - -
Lal8g0548 555 MobiDBLite consensus disorder prediction 248 308 - -
Lal8g0548 555 SUPERFAMILY Leucine zipper domain 386 441 IPR046347 GO:0003700|GO:0006355
Lal8g0548 555 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 384 447 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0548 Lal-Chr8 3784668 3788628 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal8g0548 bZIP_1 1.1e-11 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0548 8 3784668 3788628 Lal8g0548 8 3784668 3788628 ECH
Lal8g0548 8 3784668 3788628 Lal25g0535 25 3864960 3873171 LSH
Lal8g0548 8 3784668 3788628 Lal10g0874 10 16256082 16260698 LSH