Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0544 ATGGACCGACGGTGGCCATGGAAGAAGAAATCATCAACTGATAAGGGTGTGCTTGATAAAGTTGCTGCTGAATTGGACTCTGTGGCTGTTTCTTCCACTCAGAGTAATCATCAGGAAACTTATAAGAAGCCGAACTATGTCAAAATCTCTGTGGAATCGTATACACATTTGACTGGCTTGGAGGATCAGGTAAAGACATATGAAGAAAAAGTTCAGACATATGAAGAAAATGTTCAAACATATGAAGAAAAGGTTCAGACATATGAGGAAAAAGTTCAGGAACTGGAGGATGAGATCTCAGAATTGAATGAAAAACTGTCTGCAGCGAACTTGGAGATAAATACAAAAGAAACCTTGGTAAAACAACATGCCAAAGTAGCTGAAGAGGCTGTCTCAGGATGGGAAAAGGCTGAGGCAGAAGCTTTGTCATTGAAGAACCATCTAGAATCTGTCACTCTCTCAAAACTCACCGCTGAGGATCATGCAGCACAGTTGGATGGTGCACTTAAAGAATGTATGCGTCAGATAAGAAACTTGAAGGAAGAACATGAGCATAAAATACAGGAACTTGCTCTGGCAAAAACCAAGCAGCTAGACAAAATTCAGGGTGAGCTTGAGGTAAGGATAGGTAACTTTGAACAGGAGCTCCTAAGGTCTGCTGCTGAAAATGCAGCTCTGTCAAGATCCTTGCAGGAGCGGTCCAACATGCTGATGAGAGTGAATGAAGAAAAAGCTCATGCTGAGTCTGAAATTGAGCATCTTAAGGGCAACATAGAATCATGTGAAAGAGAAATCAATTCACTTAAATATGAACTTCATCTTATTTCCAAAGAGCTGGAGATTCGCAACGAAGAAAAGAACATGAGTATGAGGTCTGCAGAAGTTGCTAACAAGCAGCATGTGGAGGGTGTTAAAAAAATTGCTAAGTTAGAAGCAGAGTGCCAACGATTACGTGGTCTAGTACGGAAAAAGCTACCTGGTCCTGCTGCACTTGCACAAATGAAGTTAGAAGTTGAAAATCTTGGACGAGAATATGGAGATACTAGATTCAGGAAGTCTCCTGTCAAACCTGCTATTCCTCATCTGTCCCCATTCCCCGAGTTCTCCCTTGAGAATGTACAGAAATTCCAGAAGGATAATGAATTTCTTACCGAGCGTTTATATGCAGTGGAAGAAGAAACAAAGATGCTAAAAGAAGCTTTGGCAAAACGTAACAGTGAACTGCAGGCCTCAAGGAGTATGTGTGCTAAAACACTAAGCAAGCTTCAAACTTTGGAGGCACAAGTGTCAACTAATCAACAGAAGGGATCTACAAAATCCATGCATATAACCCATGAAAGCATTCACAGTCAAAATGCAAGCTATGGGCCAAGCTTAATGTCCATGCCTGAAGATGGAAATGATGATGCGGTAAGTTGTGCCGAGTCTTGGTCTACAGCAGTAATCTCTGACCTATCCAAATTCTCAAAAGAAAAGTGTGCCGAAGAACCAAGCAAATCTGAAGCCACTAAGAAGTTGGAACTAATGGATGACTTTTTGGAGGTGGAGAAGTTGGCTCGTTTATCAAATGATTCTGATGGAGATGCATCTGTTTCAGTTTCATCAAACAATAAGAGCACTGAAATTGTGACCGGTGATGTATCAGAAGTCAGTATTGGCAACGATGATCCCTCCGAAGAGAAGAATGATTTAAATCTATTGCCAAGTCAAGTGTCTTGTGGGTCAGAATTGTCTGGAACTTATCAATCTGATGTTGATAGCTCATCCATAGCTGTGCTTCGATCAAAAATATTATCTGTTTTTGAGTCTATGGCAAAGGATGCTGATATAGGGATGATCATGGAGGATGTTAAACATGTTCTTGAAGATGCACATAACACTTCCATGAAACACTCTGTAGCAGTCATTCCCCACGATATCATGCCTTCTGCTACTACATGTGATAAGCAGGATAATCTTGAAGGTACTGATTTAAATGCTGAAAAAGAACTCATTTCATCCCAACAACTGGCAGAATGTGTGCAGTTAACTTCAGATTTAGAAGCTGCAGTTTCTCAGATTCACAACTTTGTATGCTTCCTTGGCAGGGAGGCAATGGTAGTTCATGATCTAACTTCTAGTGGAGATGGAATAAGCCAAAAAATTGAGGAGTTCTCTGTCACCTTTAATAAAGTTATATCCAATGAAGCAAGTTTGTTACAGTTTGTTCTTGACTTGTCAATTGTTTTAGCTAACGCAAATGAATTCAGATTTAATATCCTTGGTTACAAGAGTACAGAAGCTGAAAATAACAGTCCTGATTGCATAGACAAGATTGCTTTGCCTGAAAATAAGTTAGTTCAAGACAGTTTACCCGGTGAAAGATATGAAAATGGTCATTCCCATATTATTAATCCCTGTTCTGATCCTGAGATTCCTGATGATGGAAATTTGATATCAGACTACGAATCAAATGCTACTTCACAAAAGATCCCTGTAGAGGAGTTTGAAGAGTTAAAATTAGAGAAGGAGAAGGCACTAGAGGATCTGTCCAAATGTGTTGAAAATCTTGAAATGACAAAGTCCGAGTTACAAGTGACTGAGCAGCTTCTAACTGAAGTTAAATCCCAATTGGCTTCTGCTCAAAGATCAAACGGCTTGGCTGAGACACAACTAAAATGTATGGCAGAGTCCTACAGGTCACTGGAAACACGTGCACAGGAGTTTGAGAGTGAACTTAATCATCTGCAAGTGAAGACTGAAACTCTGGAGAATGAACTAACAAATGAAAAGAAGGCTCATGAAGCCGCTTTGACCAAGTACATGGAGCTAGAAGATCAATTGCAAAGGTATGAGAGTTTTGCTGCAGATAATGACCATAAGACTAAGCAGGAGAGAGACGTGGCCGCTGCAGCCGAAAAGCTAGCCGAGTGTCAGGAAACCATATATCTTCTTGGCAAGCAGCTGAAAGCTCTGCATCCTCAAACAGACCCAGTGGGATCTCTGTACAGTGAGAAAGATCCAAAGGTTGAAGGCTTCACAGAGCATGAACTTCCTGCTAATAGCCCAAATTTTCAAGAGTTAGATCAAGTGGAGATGGACAATGCTGCTTCTGCTTTTGTGCAAAGACCAGGTGCAGAGTCCCCCTTGCATTTTACTAACGCTTTATACAGCCCCGATAATGAGCCGAATTTTCGAGCCGTATCTCCAGTACGGCATCCACATCACAACTCTACCATGTCAGTCTCTTCATCAGCTTCTTCTACTCCAACACCAGAGAAACATTCCCGAGGTTTTAGTAGATTCTTTTCATCAAAAGCAAAAGCTGGTAATTAA 3315 0.4087 MDRRWPWKKKSSTDKGVLDKVAAELDSVAVSSTQSNHQETYKKPNYVKISVESYTHLTGLEDQVKTYEEKVQTYEENVQTYEEKVQTYEEKVQELEDEISELNEKLSAANLEINTKETLVKQHAKVAEEAVSGWEKAEAEALSLKNHLESVTLSKLTAEDHAAQLDGALKECMRQIRNLKEEHEHKIQELALAKTKQLDKIQGELEVRIGNFEQELLRSAAENAALSRSLQERSNMLMRVNEEKAHAESEIEHLKGNIESCEREINSLKYELHLISKELEIRNEEKNMSMRSAEVANKQHVEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVENLGREYGDTRFRKSPVKPAIPHLSPFPEFSLENVQKFQKDNEFLTERLYAVEEETKMLKEALAKRNSELQASRSMCAKTLSKLQTLEAQVSTNQQKGSTKSMHITHESIHSQNASYGPSLMSMPEDGNDDAVSCAESWSTAVISDLSKFSKEKCAEEPSKSEATKKLELMDDFLEVEKLARLSNDSDGDASVSVSSNNKSTEIVTGDVSEVSIGNDDPSEEKNDLNLLPSQVSCGSELSGTYQSDVDSSSIAVLRSKILSVFESMAKDADIGMIMEDVKHVLEDAHNTSMKHSVAVIPHDIMPSATTCDKQDNLEGTDLNAEKELISSQQLAECVQLTSDLEAAVSQIHNFVCFLGREAMVVHDLTSSGDGISQKIEEFSVTFNKVISNEASLLQFVLDLSIVLANANEFRFNILGYKSTEAENNSPDCIDKIALPENKLVQDSLPGERYENGHSHIINPCSDPEIPDDGNLISDYESNATSQKIPVEEFEELKLEKEKALEDLSKCVENLEMTKSELQVTEQLLTEVKSQLASAQRSNGLAETQLKCMAESYRSLETRAQEFESELNHLQVKTETLENELTNEKKAHEAALTKYMELEDQLQRYESFAADNDHKTKQERDVAAAAEKLAECQETIYLLGKQLKALHPQTDPVGSLYSEKDPKVEGFTEHELPANSPNFQELDQVEMDNAASAFVQRPGAESPLHFTNALYSPDNEPNFRAVSPVRHPHHNSTMSVSSSASSTPTPEKHSRGFSRFFSSKAKAGN 1104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0544 1104 Coils Coil 57 119 - -
Lal8g0544 1104 PANTHER FILAMENT-PLANT-LIKE PROTEIN 87 1103 - -
Lal8g0544 1104 PANTHER FILAMENT-PLANT-LIKE PROTEIN 1 86 - -
Lal8g0544 1104 Coils Coil 954 974 - -
Lal8g0544 1104 Pfam Filament-like plant protein, long coiled-coil 116 990 IPR008587 -
Lal8g0544 1104 Coils Coil 829 877 - -
Lal8g0544 1104 SUPERFAMILY Tropomyosin 829 984 - -
Lal8g0544 1104 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 87 1103 - -
Lal8g0544 1104 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 86 - -
Lal8g0544 1104 Coils Coil 162 196 - -
Lal8g0544 1104 Coils Coil 373 393 - -
Lal8g0544 1104 MobiDBLite consensus disorder prediction 1067 1088 - -
Lal8g0544 1104 Coils Coil 885 940 - -
Lal8g0544 1104 Gene3D - 49 134 - -
Lal8g0544 1104 SUPERFAMILY Tropomyosin 57 281 - -
Lal8g0544 1104 MobiDBLite consensus disorder prediction 1056 1104 - -
Lal8g0544 1104 Coils Coil 230 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0544 Lal-Chr8 3713531 3719904 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0544 8 3713531 3719904 Lal8g0544 8 3713531 3719904 ECH
Lal8g0544 8 3713531 3719904 Lal25g0534 25 3840209 3846030 LSH
Lal8g0544 8 3713531 3719904 Lal4g0073 4 424911 430286 PCT
Lal4g0073 4 424911 430286 Lal8g0544 8 3713531 3719904 PCT