Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0540 ATGGCTCTCCTAACTTTCTTGCCTGAACAATCTGACCCCAAAAAGAAGCAGCAACTCCTCAAACACAAGCACAAACAAAAACAACAAAAACAACAACAGAAGCAAAAGGAAAAGGTAAAGGAAAAGGAGAAAGAGAAACATCCTTCTTCATGGGACCAAATCAAAAACCTTATAACCTGCAAACAAATCGAAGGTTCAAGAGTACATGACCCCTCCAAAGTTGGTTACTCCATGTTAGGGTCTTCTTGTAGCTCCATATGCAGCTTCAGAGATGTTCATGGAAATACTAGAGTAGTTCATAGAGCTGATAACTCTTCCCCTGAGAGTAGCACTTTAGGTCAAGAAAATGGTTTACTCAATAGGAAATCTCTCACTACTGGCTCATCATTAACTCGTTCAGGGAAACCCAACGGTGGAACAACTTATACATCTTCCAACAGAGGAATTCATCAATTCAGAAAGCTTTCAGGATGTTATGAATGTCACATGATCATTGACCCTAAAAGGCTACCAATTCCAAGGAGCACTGTCTGTGCTTGCTCTCAGTGTGGAGAGATCTTCCCTAAGATGGAAAGCTTGGAGCTTCACCAAGCTGTTCGTCATGCTGTTTCGGAGCTTGGACCAGAGGATTCGGGTCGTAACATAGTTGAGATAATATTCAAATCAAGCTGGTTGAGGAAGGACAACACAATATGCAAGATCGAACGGATATTAAAAGTCCACAACACCCAACGCACGATCCAACGCTTCGAGGACTGCAGGGATACCGTAAAGACCCGTGCACTTAACACCACCAAAAAAAACCCCAGGTGTGCTGCAGACGGCAACGAGCTCCTACGCTTTCACTGCACTACCTTAACCTGCGCGTTGGGCTCACGCGGATCCTCCGCCTTGTGCTCCGCCGTTCCAGGCTGCGGCGTCTGCACCATCGTCAGGCACGGGTTCCGTGGCGGCGATGGGAGTAAGGGTGTGAAGACCACCGCGAGTAGTGGTAGGGCCCACGACTCGGTGAAGTGTGGTGTTGAAAATAGAAGGGCTATGTTGGTGTGTCGTGTGATTGCGGGGAGAGTGAAGCGCGTGGAGAATGACGCGCCGCCGTTGACGGAGGAGGAAAATGTGTCGGTGGTTGGGTCCTATGATTCTGTAGCTGGGTACACAGGAATCTACTCCAATCTCGAGGAGTTACTTGTTTTCAACCCAAAAGCTATTCTTCCTTGTTTTGTGGTCATTTACAAGGTGCTTCCATGTTAA 1251 0.4708 MALLTFLPEQSDPKKKQQLLKHKHKQKQQKQQQKQKEKVKEKEKEKHPSSWDQIKNLITCKQIEGSRVHDPSKVGYSMLGSSCSSICSFRDVHGNTRVVHRADNSSPESSTLGQENGLLNRKSLTTGSSLTRSGKPNGGTTYTSSNRGIHQFRKLSGCYECHMIIDPKRLPIPRSTVCACSQCGEIFPKMESLELHQAVRHAVSELGPEDSGRNIVEIIFKSSWLRKDNTICKIERILKVHNTQRTIQRFEDCRDTVKTRALNTTKKNPRCAADGNELLRFHCTTLTCALGSRGSSALCSAVPGCGVCTIVRHGFRGGDGSKGVKTTASSGRAHDSVKCGVENRRAMLVCRVIAGRVKRVENDAPPLTEEENVSVVGSYDSVAGYTGIYSNLEELLVFNPKAILPCFVVIYKVLPC 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0540 416 MobiDBLite consensus disorder prediction 1 51 - -
Lal8g0540 416 ProSiteProfiles Zinc finger C2H2 type domain profile. 178 206 IPR013087 -
Lal8g0540 416 MobiDBLite consensus disorder prediction 17 31 - -
Lal8g0540 416 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 34 414 - -
Lal8g0540 416 MobiDBLite consensus disorder prediction 101 146 - -
Lal8g0540 416 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 34 414 - -
Lal8g0540 416 SUPERFAMILY ADP-ribosylation 203 412 - -
Lal8g0540 416 Coils Coil 16 46 - -
Lal8g0540 416 Gene3D - 202 413 - -
Lal8g0540 416 MobiDBLite consensus disorder prediction 32 51 - -
Lal8g0540 416 ProSitePatterns Zinc finger C2H2 type domain signature. 178 201 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0540 Lal-Chr8 3685266 3689528 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lal8g0540 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0540 8 3685266 3689528 Lal8g0540 8 3685266 3689528 ECH