Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0537 ATGATCCGGTTTATTCTGTTGCAGAACAGGCAGGGAAAAACTCGTTTAGCCAAATACTACGTTCCTCTCGAGGATTCCGAGAAGCACAAGGTCGAATACGAGGTTCACCGCCTCGTAGTAAACAGAGACCCCAAACATACAAATTTCGTTGAGTTTCGTACCCACAAAGTAATATATCGACGATATGCTGGCTTGTTTTTCTCACTCTGTGTTGACATCACTGATAATGAGTTGGCATATTTAGAATGCATCCATTTGTTTGTGGAAATATTGGATCACTTCTTCAGCAATGTGTGTGAATTGGATTTGGTCTTTAACTTCCACAAGTTTACATACCTATTCCTGAAGGTCTATCTTATACTTGATGAATTTATTCTAGCGGGTGAACTGCAAGAAACTAGCAAGAGGGCTATCATTGAGAGAATGGGGGAACTGGAAAAACTAGAGTGA 450 0.4044 MIRFILLQNRQGKTRLAKYYVPLEDSEKHKVEYEVHRLVVNRDPKHTNFVEFRTHKVIYRRYAGLFFSLCVDITDNELAYLECIHLFVEILDHFFSNVCELDLVFNFHKFTYLFLKVYLILDEFILAGELQETSKRAIIERMGELEKLE 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0537 149 PANTHER AP COMPLEX SUBUNIT SIGMA 2 149 - -
Lal8g0537 149 CDD AP2_sigma 1 148 IPR027156 GO:0016192|GO:0030122|GO:0035615|GO:0072583
Lal8g0537 149 PANTHER ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY 2 149 IPR016635 GO:0015031
Lal8g0537 149 PIRSF AP_complex_sigma 1 149 IPR016635 GO:0015031
Lal8g0537 149 SUPERFAMILY SNARE-like 1 143 IPR011012 -
Lal8g0537 149 Pfam Clathrin adaptor complex small chain 1 148 IPR022775 -
Lal8g0537 149 Coils Coil 145 149 - -
Lal8g0537 149 Gene3D - 1 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0537 Lal-Chr8 3665348 3673853 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0537 8 3665348 3673853 Lal8g0537 8 3665348 3673853 ECH
Lal8g0537 8 3665348 3673853 Lal10g0883 10 16341421 16345568 LSH