Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1328 ATGGCACAAGATACTGTTTCTGATGTTGACTCACCTCGGCGACGTTATGGCTTATTACGAGACCAGGTTCAACTAGTTAAAAGAAAGGACTCTGATCGCTATGAAATCATTCCAATCCAAGATACTTTGTCATTTGAGAAAGGGTTCTTCATAGTCATTCGTGCATGTCAGTTGTTAGCTCAGAAGAATGATGGTATCATATTAGTAGGAATTGCAGGTCCTTCTGGAGCAGGGAAAACTGTTTTCACTGAGAAAGTCCTCAATTTTATGCCAAGCTTAGCTGTCATATCAATGGACAATTATAATGATTCTAGTCGAATCATAGATGGCAACTTTGATGATCCTCGGTTGACGGATTATGATACCTTGCTAAAAAATATACAGGGTCTTAAAGCAGGGAAGCCAGTTCAAGTTCCAATATACGATTTCAAGTCTAGTTCTCGCATAGGTTACAGGGCTGTCGAAGTCCCCAGCTCCCGTATCGTAATCATAGAAGGAATCTATGCCTTAAGTGAAAAGCTTAGACCCTTGCTTGATCTTCGTGTTTCTGTCACTGGTGGAGTTCATTTTGACCTTGTCAAACGTGTTTTACGAGACATTCAACGTGCTGGTCAAGAGCCTGAAGAAATAATTCATCAAATCTCTGAAACGGTATATCCTATGTATAAAGCTTTTATTGAGCCTGATCTTCAAACAGCACATATAAAAATTACCAACAAGTTTAATCCATTCTCTGGATTCCAGAATCCGACCTACATATTGAAGTCAGCAAGAGCTGTGACAGTAGACCAAATCAAGGCAGTTATTGCTGCAGAGCATACTGAAAACCAAGAAGAAACATACGACATATATCTTCTACCCCCTGGGGAAGATCCTGAAGCTTGTCAATCATATTTAAGGATGAGAAACCGAGATGGAAAGTACAATCTTATGTTTGAGGAATGGGTTACAGATAGTCCATTCATAATATCACCTAGAATTACTTTTGAGGTCAGTGTGCGCCTCCTTGGAGGGCTGATGGCCTTGGGATATACAATTGCAACTATTCTGAAAAGAATCAGTCATGTCTTTCATGATGATAAAGTATCCGTAAAAACTGATTGGCTAGAACAACTTAATCGGCTTTATGTTCAGGTGCAAGGGAGAGATAGGAACTATGTTAAACTTGTAGCACAGAAACTGGGGTTGGATGGTTCATATGTTTCTCGCACCTACATTGAACAAATACAACTAGAAAAGCTCGTAAATGATGTGATGGCACTGCCAGATGATCTGAAATCAAAACTCAGCATAGATGATGATATGGTTTTAAGTCCCAAAGAAGCCCTTTCCAGAGCTTCTACAGATAGGAGAATTAAGTATCTTAATAGTGGCATTTCACACTCATATTCAAATCAAAGGGAGAAGAGTCTATCCAAGCTCACTAGACTAGCTATAAATAACAGATTTGATGGGAGAGTTCTAGAATCACCACCTGCACCGATTGCTAACCAAGGAGTTGTCACTCATCTTTCTGAACAAATTTCCACATTAAATGAAAGAATGGATGAGTTCACCTCTCGTATTGAAGAGCTTAATTCGAAGATTGAAATCAGAGGAGTTTCAGCCAGTCAACCAAACTTGGCTCTACAGGCTGAAGCCGGCAATGCCTCAGGCCCTTCTCTCTTCGTAAATGGAATGGGCAATGGTTCATTGACTGGACCTTTGCTGCCTACTTCTTTATCCTCTTCTCAATTGGCTAGGGATTCTCCCCTCATGGAAGAGGTTTTACTTGTTGCACGAGGACAACGTCAAATCATGCATCAGCTAAACACTGTGAGCAATCTTTTGCATGAATACTATGATAGGTCAAAGCTGAGAAGAACAGACCAAACAACCAGAATGCGTGACGTTGATTCAGTTGCCATCCCTCTGGTTCTGACATTAGCCATTGGTTCTGTTGCTGTGTATTTGTTCAAGTCATACCAAAAATAA 1974 0.4032 MAQDTVSDVDSPRRRYGLLRDQVQLVKRKDSDRYEIIPIQDTLSFEKGFFIVIRACQLLAQKNDGIILVGIAGPSGAGKTVFTEKVLNFMPSLAVISMDNYNDSSRIIDGNFDDPRLTDYDTLLKNIQGLKAGKPVQVPIYDFKSSSRIGYRAVEVPSSRIVIIEGIYALSEKLRPLLDLRVSVTGGVHFDLVKRVLRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKITNKFNPFSGFQNPTYILKSARAVTVDQIKAVIAAEHTENQEETYDIYLLPPGEDPEACQSYLRMRNRDGKYNLMFEEWVTDSPFIISPRITFEVSVRLLGGLMALGYTIATILKRISHVFHDDKVSVKTDWLEQLNRLYVQVQGRDRNYVKLVAQKLGLDGSYVSRTYIEQIQLEKLVNDVMALPDDLKSKLSIDDDMVLSPKEALSRASTDRRIKYLNSGISHSYSNQREKSLSKLTRLAINNRFDGRVLESPPAPIANQGVVTHLSEQISTLNERMDEFTSRIEELNSKIEIRGVSASQPNLALQAEAGNASGPSLFVNGMGNGSLTGPLLPTSLSSSQLARDSPLMEEVLLVARGQRQIMHQLNTVSNLLHEYYDRSKLRRTDQTTRMRDVDSVAIPLVLTLAIGSVAVYLFKSYQK 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1328 657 ProSiteProfiles CYTH domain profile. 249 411 IPR023577 -
Lal7g1328 657 Coils Coil 501 528 - -
Lal7g1328 657 PANTHER URIDINE KINASE 7 647 - -
Lal7g1328 657 Pfam Phosphoribulokinase / Uridine kinase family 69 237 IPR006083 GO:0005524|GO:0016301
Lal7g1328 657 SUPERFAMILY CYTH-like phosphatases 261 408 IPR033469 -
Lal7g1328 657 PRINTS Uridine kinase signature 66 83 - -
Lal7g1328 657 PRINTS Uridine kinase signature 133 148 - -
Lal7g1328 657 PRINTS Uridine kinase signature 189 199 - -
Lal7g1328 657 PRINTS Uridine kinase signature 225 238 - -
Lal7g1328 657 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 239 IPR027417 -
Lal7g1328 657 Pfam CYTH domain 273 405 IPR023577 -
Lal7g1328 657 Gene3D - 255 414 - -
Lal7g1328 657 Gene3D - 67 248 IPR027417 -
Lal7g1328 657 CDD UMPK_like 68 240 - -
Lal7g1328 657 PANTHER URIDINE-CYTIDINE KINASE C-LIKE ISOFORM X1 7 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1328 Lal-Chr7 18523828 18531756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1328 67 237 PRT Gene Family AT5G40870 26.667 1.34e-17 84.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1328 7 18523828 18531756 Lal7g1328 7 18523828 18531756 ECH
Lal15g0730 15 5117291 5135073 Lal7g1328 7 18523828 18531756 PCT
Lal23g0869 23 11003167 11019120 Lal7g1328 7 18523828 18531756 PCT