Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0685 ATGGGTCAGGGTCAAGATAGTGAAGGGATTATGCTCTTTGGCACAACAATTACTTTGCATGGTAAACAAAGAAACGAAGATAAGAAAGGGAATGAAGATGGAAGAGAAGAAAAAAACCCTGATAAGGTCATGCCTTGTCCAAGATGCAAGAGCATGGAAACAAAGTTTTGTTACTTCAATAACTACAACGTTAATCAAACAAGTGGCTTTGATGACAACACTTCAAGCACCACCTTACCAAAGCCTACCTTTGCTCAAACAGTGAGAGGTGCAACCACTGATTCCATTCCCCATCTTCCTCAACCATGTATCAAGGGGGACGTAGTGGCAGTTAAAATACCTGAAGCTGCTTACCAAGCTGGTCTGCAAAGATGCAAGACTCACCTTCATGGTAGACTCATCTTGGCAAAAGGGGATAAACCAACAAAATTTGTGGAGCTAAAATCCAAGCTCAAGGATCTTTGGAGCATGGTGGGAAAATGGGATATGTTGTCCTTAGGCAGAGGTTTCTACGAGTTTTCTTTCTCCTCTGTGGAAGATATGAGACTCATTTGTGCAACTGGTTCGTGGAATCTAAGGCCAGGTCTACTGAGATTATCTCTATGGACTCCTGACTTTAATCCAGAGCTGCAAAAGGTAACTCACTCCCAATGTTGGGTCAAGATTTCGGGTCTACCTCAAGAGTATTGGTGTCCTAGCATCATATTATCCATAGCTGGAGGTATAGGAACCCCCATAGCCCTTGATGAAGCCACGAAAAACAGGGCTTTTGGTCATTTTGCTAGAGCTCTGGTAGAGGTTAATCTAACAATCACAGCTCCCACTAAGATTTTGGTGGAACGTGATGGCTTCAAGTTCTTTGTGGATGTTGAAGTTGAGAACAGGCCGGCTTTCTGTTCTGGATGCCAAGCCATTGGACATGTGGTGTCTAACTGTAGAAGACTTCTTAAGGAAGTGGTGGATGAGGTGGCCAAACCAAGAAAGGTGGTTGAGTTGGATAACACAATGGGAGGAACAACCCAAGTTGTTGAGCCATCTCCTTTTAATCTTTTCATAGATCTGGAGATTGATAGGAATAAGGAAATAGAGAGGGAAGGAATGGAGAAGTTTTTTCTTAATAGGGAGGTTCCGAATAGCGAAGTCTCTGGTGAGAAGGTGGGGGACAGGGAGATTCCAACAATAGAAGGAAGTGGGGAAAATTTTAAAGTAACGGAGGAGTTGAACCCTATGGTTGCAAGGGACATGGCTATTGTTGGCCGTCTCTGGGCAGAGGATGAGGTGGGGGAGGTTGAGGAGGATCCATTCACAGTGGTGCTTTCAAAGTCACAACAGAAAAGGAAGATGAAGAAGATGCACTCCCAAAGGATTCATTTTGCCCCTGAGCCTATGATTGGTTTTGAGGAGGTCAACCCTTCTTTTTGGTCTGCTTTAAATCTTAGGTGGTTTGGATCTAATGATAGGGGTAGCTTGAAGCCTAATCTTTGGGGGCTTTGTCGTAGAGAGCTTAATCCTAGTGTTATTGCTTCCTCTGCTCAGCACATCTCAACAACGGTGGAGGTGGAAAATAAGTCTCTTTTTGTCAATGCTGTGTATGCTCACAATAACTACATGGTTAGAAGACAGCTTTGGGCTGATATCCAAGCTGTAATGGATGATAATCAGGGACCTTGGTGCTGCTTGGGAGATTTTAATGTGGTGTTGGGGGCCCATGAGTGCAGAGGTCCCAACCTTCCTCCTAGGATGCCTTCTGAGGAGTTTAAATTGTTCTCAGATGCTGGGAATTTGATTCACTTAATGACTAGAGGAGCTAAATTTACCTGGACGAATAGAAGGAGAGGTGCTGCTGCAACAGAAAAAAGGCTTGATAGATGCCTCGCTAATGAAAACTGCTTATCAACTTGGAATCAGTTTTCTTGCTCCACACTTCCTAGAATTGCTTATGACCACCATCCTCTGCTTCTTAGTTGCTCTTCTGGCACAACAAGGAACAGTGCTTTTAAATTTCATAATATGTGGTTGGAGCATGGAGATTGTCGTAGACTGGTGGAGGAAAATTGGAGTTTAGAGGTGGTGGGTTGCCCCATGTTTGTGCTTTCTCATAAGCTAAAGCTGCTTAAACAAAAGTTGAAAGTCTGGAATATCCAGGTTTTTGGTAATATCCATGAGAGGGTGAAGAGGGCTTTAGCCAATGTGGCTGCTATACAAGAGGATATCACTTTGAGGGGTCAGGTTGAGGAGCTGCTGAATCAGGAGCAATTGGCTCAAAGTGAGCTTCTGCTAGCTCTGGATGTGGAGGAAAAGTTCTGGAAGGAAAAAGCTAGGATTAGTTGGCAGTCCAATGGAGATAGAAATACTAGCTTTTTCCACAAATTAACTAAGGTCAGACAAGCCACAAGAGCTCTAGCTTCCCTTCGAGATGGTGAAAACATCCTGGTTGACCAAGATGCTATTTCTCAACATGTGCTGGGTTACTTCACAGATATCTATGCCTCTCCTAGTGAAGCTGTCCCTAATCTTCTAATTCAATCTGTGATTCCTGCTCTAGGATTGAAAACAAACCTGATTGCTTTAAACAGCTTGATTAAAGATTATGCCAATGCTTCGGGGCAACATGCTAATCTACCTAAGTGTAGGTTTTATACTTGCAGTGTGAATTCTAGAAGGATCCATCAAATTGCTGACTTATTGGGTTTTAGCCAAGGAAATCTACCTTTTAGCTACTTAGGTGTGCCTTTGTTTAAAGGCAAACCTAGAAGGCTTCACCTTCAGCCTATAGCTGACAGGATTATTGCTAAGCTTGCTTCTTGGAAAGGCCTGTCTTTATCAATTATGGGCAGGGTTGAGCTGGTCAAGTCAGTTATCCAAAGTATGGTGGCCTACAGTTTTCACATCTATGCTTGGCCTTCTAGCTTGATCAAGTCTCTAGAGGTCTGCATAAGGAACTTCATCTGGTCTGGGAACACTAACACTAAAAAAATTGTCACTGTTGCTTGGGCAAAAGTTTGCTCCCCTATCATGGCTGGTGGTTTGGGCATGAGGAATGTGGCCAGATTTGAGAACAAGCTTATTGCTGTGTTGCAGGCAAAGTCGAGGATTAAGGAGCATGTCGGCGAAAGGCTAAACTGTCAGGTTGTTTCCTGGACGGTGGACTTTATGATTAGTCCACCGTCCAATTTGACTGAGTGGCAGGTTGCCACCGTGATTCATGGTGATTACGGACAGGTTTTTCCGTCTAAACAATGA 3243 0.4366 MGQGQDSEGIMLFGTTITLHGKQRNEDKKGNEDGREEKNPDKVMPCPRCKSMETKFCYFNNYNVNQTSGFDDNTSSTTLPKPTFAQTVRGATTDSIPHLPQPCIKGDVVAVKIPEAAYQAGLQRCKTHLHGRLILAKGDKPTKFVELKSKLKDLWSMVGKWDMLSLGRGFYEFSFSSVEDMRLICATGSWNLRPGLLRLSLWTPDFNPELQKVTHSQCWVKISGLPQEYWCPSIILSIAGGIGTPIALDEATKNRAFGHFARALVEVNLTITAPTKILVERDGFKFFVDVEVENRPAFCSGCQAIGHVVSNCRRLLKEVVDEVAKPRKVVELDNTMGGTTQVVEPSPFNLFIDLEIDRNKEIEREGMEKFFLNREVPNSEVSGEKVGDREIPTIEGSGENFKVTEELNPMVARDMAIVGRLWAEDEVGEVEEDPFTVVLSKSQQKRKMKKMHSQRIHFAPEPMIGFEEVNPSFWSALNLRWFGSNDRGSLKPNLWGLCRRELNPSVIASSAQHISTTVEVENKSLFVNAVYAHNNYMVRRQLWADIQAVMDDNQGPWCCLGDFNVVLGAHECRGPNLPPRMPSEEFKLFSDAGNLIHLMTRGAKFTWTNRRRGAAATEKRLDRCLANENCLSTWNQFSCSTLPRIAYDHHPLLLSCSSGTTRNSAFKFHNMWLEHGDCRRLVEENWSLEVVGCPMFVLSHKLKLLKQKLKVWNIQVFGNIHERVKRALANVAAIQEDITLRGQVEELLNQEQLAQSELLLALDVEEKFWKEKARISWQSNGDRNTSFFHKLTKVRQATRALASLRDGENILVDQDAISQHVLGYFTDIYASPSEAVPNLLIQSVIPALGLKTNLIALNSLIKDYANASGQHANLPKCRFYTCSVNSRRIHQIADLLGFSQGNLPFSYLGVPLFKGKPRRLHLQPIADRIIAKLASWKGLSLSIMGRVELVKSVIQSMVAYSFHIYAWPSSLIKSLEVCIRNFIWSGNTNTKKIVTVAWAKVCSPIMAGGLGMRNVARFENKLIAVLQAKSRIKEHVGERLNCQVVSWTVDFMISPPSNLTEWQVATVIHGDYGQVFPSKQ 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0685 1080 PANTHER RETROTRANSPOSON, UNCLASSIFIED-LIKE PROTEIN 844 1017 - -
Lal7g0685 1080 PANTHER RETROTRANSPOSON, UNCLASSIFIED-LIKE PROTEIN 441 761 - -
Lal7g0685 1080 MobiDBLite consensus disorder prediction 21 41 - -
Lal7g0685 1080 Gene3D Endonuclease/exonuclease/phosphatase 466 655 IPR036691 -
Lal7g0685 1080 SUPERFAMILY DNase I-like 478 654 IPR036691 -
Lal7g0685 1080 MobiDBLite consensus disorder prediction 15 41 - -
Lal7g0685 1080 Pfam Domain of unknown function (DUF4283) 140 265 IPR025558 -
Lal7g0685 1080 Pfam Dof domain, zinc finger 41 66 IPR003851 GO:0003677|GO:0006355
Lal7g0685 1080 PANTHER REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED 441 761 - -
Lal7g0685 1080 PANTHER REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED 844 1017 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0685 Lal-Chr7 13830760 13836683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0685 5 70 C2C2-Dof Transcription Factor Family AT1G29160 49.412 1.38e-17 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lal7g0685 DUF4283 4.3e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0685 - - lang:109342412 768.844