Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1153 ATGGAAAGAGAAAAGTGGAAAGAACATAACAATAATGGGTATTATGATGAATTTCTTTGTGATGTTTATGGTGCTGTAGATCTAGACACACCCATTAGAGAACGTAGCCCTGTGATTCCTCCTTCAATTTCTGTTTCTTCTTCTTCTAGACCACTTGGCCATATAGAGCATCATGTTTCCAAATTTGACACTTTGGCTGGTATTGCAATCAAGTATGGTGTTGAGGTCCCGGACATCAAAAAGATGAATGGGCTTGTTACGGATCATCAAATGTTTGCACTTAAAACTCTCCAAATTCCACTACCCGGAAGGCACCCTCCATCTCCTTGTTTATCAAATGGTTCTAGTACTATAGGGCCTGGTAACTCTGACCACATTTCACCCGATCATGCACACCGTGAACTGTTTGAATCATTTCCGTCCTTGAGAACGAAGTCTTCTGAGCAGAGGGTCTCCCCAGCCATGAGCTCTTTACAGGGTTACTATGGACTTAAAGGGTCCTCTACATCTTCCGAGTACTCACCTATGTCTGACCGGCCCATGAGTCGTCACCGGAAATCTAAAAGTTTGGTCAATGTAATTTTAGAAGAGATTATGGAAAAGTGTGATACCGTACCAGCTGCTGGAACCTGGGAAAGCGACCCCGATAAGCGGAATGATAAACTTGTCCGTAGGCGTCAAAAATCAGAAGCTGACTTTACAAGGATACCAGAGTTGCTCATGAGACCAGATAATAGCAGCAGTGGTGTTCTTCCATCAAGAACAGTAAAGGGCTTAGCTCTGAGGCAGAAAGCGTCTAGTCGAACCGCAACCGATTCCGAATCGAATGGTTTGAGTCCTGTGCCGATAGGTTTCGGGGATGCTTCTCTAACTGATGCATCATCTGGTGTGAGGAAATCATCAAGTACATCAAATTTACAAGATCAGGTTAACAATGGCTCTTCATCATCCATTTGGCCAACCTCAAGGTGGAATTTGAAACCAGATATACAGTCTTTTACAACTTCAGCCATTGCAAAACCAATCTTTGATGGCTTGCCAAAGCCTATAACTGGTAGAAGAAATAAAGCTGCACTTGATTAA 1083 0.4303 MEREKWKEHNNNGYYDEFLCDVYGAVDLDTPIRERSPVIPPSISVSSSSRPLGHIEHHVSKFDTLAGIAIKYGVEVPDIKKMNGLVTDHQMFALKTLQIPLPGRHPPSPCLSNGSSTIGPGNSDHISPDHAHRELFESFPSLRTKSSEQRVSPAMSSLQGYYGLKGSSTSSEYSPMSDRPMSRHRKSKSLVNVILEEIMEKCDTVPAAGTWESDPDKRNDKLVRRRQKSEADFTRIPELLMRPDNSSSGVLPSRTVKGLALRQKASSRTATDSESNGLSPVPIGFGDASLTDASSGVRKSSSTSNLQDQVNNGSSSSIWPTSRWNLKPDIQSFTTSAIAKPIFDGLPKPITGRRNKAALD 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1153 360 MobiDBLite consensus disorder prediction 260 278 - -
Lal6g1153 360 Gene3D LysM domain 42 106 IPR036779 -
Lal6g1153 360 PANTHER LOC443603 PROTEIN-RELATED 44 360 IPR045030 -
Lal6g1153 360 MobiDBLite consensus disorder prediction 143 186 - -
Lal6g1153 360 PANTHER PEPTIDOGLYCAN-BINDING LYSM DOMAIN-CONTAINING PROTEIN 44 360 - -
Lal6g1153 360 CDD LysM 63 99 IPR018392 -
Lal6g1153 360 MobiDBLite consensus disorder prediction 207 322 - -
Lal6g1153 360 Pfam LysM domain 57 100 IPR018392 -
Lal6g1153 360 MobiDBLite consensus disorder prediction 143 177 - -
Lal6g1153 360 SMART LysM_2 56 100 IPR018392 -
Lal6g1153 360 MobiDBLite consensus disorder prediction 213 237 - -
Lal6g1153 360 SUPERFAMILY LysM domain 55 100 IPR036779 -
Lal6g1153 360 ProSiteProfiles LysM domain profile. 55 99 IPR018392 -
Lal6g1153 360 MobiDBLite consensus disorder prediction 293 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1153 Lal-Chr6 8854877 8859067 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g1051 22 9286185 9289390 Lal6g1153 6 8854877 8859067 LSH