Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1056 ATGGGTACTCTTCAGTCTTTGAGAAAAGCCTATGGTGCTTTCAAAGACACTACCAAAGTTGGTCTTGCACATGTCAATAGCGATTATGCGGATTTGGATGTTGCTATAGTCAAAGCTACTAATCATGTTGAATGTCCTCCAAAAGAGAGACACCTCAGAAAAATTCATTTTGCTGTTAGCGCTGTACAACCTAGAGCTGATGTTGCTTACTGCATTCATTCCCTTGCTCGTCGATTGGCGAAGACGCGAAATTGGACAGTGGCACTGAAAACACTGATAGTCATCCATAGGTTGCTGAGGGAGGGTGATCCTACTTTTAGAGAAGAACTTCTTAATTTTTCGCAGAGGGGACGCATTCTCCAACTTTCTAATTTCAAAGATGAATCTAGTCCAATTGCTTGGGATTGCTCTGCCTGGGTACGTACTTATGCATTCTTTTTGGAAGAAAGACTTGAATGTTTCCGAATTCTGAAGTATGATATTGAAGCTGAGCGTCTACCGAAGTCTGCCCCGGGGCAGGAAAAGGGGCACAGCAGGACCAGGGATTTGGATAGTGAGGAGCTATTGGAGCAGTTGCCTGCTTTGCAGAAGCTGCTTTATCGCCTTGTTGGTTGCCGGTTTAGTTTAAATCCGGAAGGTGCAGCTTTTAGCAATCATGTGATACAATATGCCTTAGCTCTGGTACTAAAAGAAAGCTTTAAGATCTATTGTGCTATTAACGACGGCATTATCAATCTTGTCGATAAGTTTTTTGAGATGTCCAGACATGAAGCTATTAAAGCCCTTGATGTCTATAAACGTGCGGGTCAGCAGGCAGCAAGTCTCTCTGATTTCTATGAAAGCTGCAAAGGGTTGGAACTTGCTAGAAATTTTCAGTTTCCTGTCTTAAGAGAGCCTCCACAATCTTTTCTTACAACCATGGAGGACTACATAAGGGAGGCACCACGAGTAGTTACGGTTCCAACTGAGCCATTGTTGACTTATAGACCCGAAGAAGACGATCTCACAATTGAAGACACTAAATCATTTGTTGAAGAACAGGAGCCATCAGTGACTGTTGATGATGTTATTGTCTCTAAGTCTGAGCCTCCTCCTGCTGCTTCTGCTCCTCCTCCTCCACCCTCTCACAACAATTCTGACACTGGAGACTTACTGGGATTGAATGACATTACTTTTGATGCTTCATCAATAGAAGAAAGAAACGCTCTTGCCTTAGCCATTGTCCCCACTGAAACCGGCACAACATCAAGTGCTTCTCAAGCAAATGATTTTGATCCATCCGGCTGGGAGCTTGCACTGGTCACCATTCCAAGTACCAATATTTCTTCGGTCAATGAGAGGCAATGGGCTAGAATTCTCCAAAATGATATTGTTCCTAACCAACCACAGAGGCCAAATAGTAACAAACCAGAGGGAATGTGTTTCATTAATCTCACATGGTTGTCTTCACTAGCTGGTGGATTGGATTCTCTCACCCTTAACAGCTTATACGACGAAGGAGCATATAGATCGGCACAGCAACCGGTATATGGAGCACCAACCCCATATCCATTTGGAATGCAAGAAGATCCTTTTGCTTCATCAAGCAGCATCCCTCCCCCATCCAATGTCCAAATGGCGGCAATGGCGCAACAACAGCAAGTAAATTCATTTGGTCCTTACCAACCTTATCAGCTACAACAATCACATATGATGATGAACCCAGCAAATCCTTTTGGAGATGCAGGGTATGGAGCATTTCCTGTGAATTCAGTTTCTCACCCACAGCATAACAACCCATTTGGAAGCACTGGTTTGTTATAA 1803 0.4359 MGTLQSLRKAYGAFKDTTKVGLAHVNSDYADLDVAIVKATNHVECPPKERHLRKIHFAVSAVQPRADVAYCIHSLARRLAKTRNWTVALKTLIVIHRLLREGDPTFREELLNFSQRGRILQLSNFKDESSPIAWDCSAWVRTYAFFLEERLECFRILKYDIEAERLPKSAPGQEKGHSRTRDLDSEELLEQLPALQKLLYRLVGCRFSLNPEGAAFSNHVIQYALALVLKESFKIYCAINDGIINLVDKFFEMSRHEAIKALDVYKRAGQQAASLSDFYESCKGLELARNFQFPVLREPPQSFLTTMEDYIREAPRVVTVPTEPLLTYRPEEDDLTIEDTKSFVEEQEPSVTVDDVIVSKSEPPPAASAPPPPPSHNNSDTGDLLGLNDITFDASSIEERNALALAIVPTETGTTSSASQANDFDPSGWELALVTIPSTNISSVNERQWARILQNDIVPNQPQRPNSNKPEGMCFINLTWLSSLAGGLDSLTLNSLYDEGAYRSAQQPVYGAPTPYPFGMQEDPFASSSSIPPPSNVQMAAMAQQQQVNSFGPYQPYQLQQSHMMMNPANPFGDAGYGAFPVNSVSHPQHNNPFGSTGLL 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1056 600 PANTHER OS05G0549000 PROTEIN 1 453 - -
Lal6g1056 600 PANTHER OS05G0549000 PROTEIN 482 583 - -
Lal6g1056 600 SMART enth_2 30 161 IPR013809 -
Lal6g1056 600 MobiDBLite consensus disorder prediction 360 387 - -
Lal6g1056 600 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 453 IPR045192 GO:0048268|GO:0072583
Lal6g1056 600 PANTHER CLATHRIN ASSEMBLY PROTEIN 482 583 IPR045192 GO:0048268|GO:0072583
Lal6g1056 600 Gene3D ANTH domain 173 328 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Lal6g1056 600 CDD ANTH_N 32 154 - -
Lal6g1056 600 Gene3D - 6 161 IPR008942 -
Lal6g1056 600 Pfam ANTH domain 31 313 IPR011417 GO:0005543
Lal6g1056 600 SUPERFAMILY GAT-like domain 178 313 - -
Lal6g1056 600 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Lal6g1056 600 SUPERFAMILY ENTH/VHS domain 31 162 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1056 Lal-Chr6 7663312 7670025 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g1056 6 7663312 7670025 Lal6g1056 6 7663312 7670025 ECH
Lal22g0934 22 7418061 7428026 Lal6g1056 6 7663312 7670025 LSH