Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1054 ATGATATGTGATGCCACACAAATCCAGAAAAACCCATCTTTGTTTCTCCAAAACATGTTGGCTTCAACTATTCTTCTAACACCCTCTACCTCAAATCTCAACCTTTCACATTTCTTCACAACACAATCTCCATCATCACAATTTCACCAAAGAAACCCCAAAACTATAGTGACCCTTTTTTCCAAATCAATTTCCAAACTTGTTGTGGTTGCCAGGGTCAGTAGTAACGGTCATGATGGCGCCATTGATGCTACTTCTCAACAACAGTCTTCACCACCTCCTGGCATTGATACCATGAACAGTACATCTTCTAGCCTTGGTGATGGTTATGTGGCCTTATTTGTTCGAATGTTAGGCCTAGATCATGATCCCCTGGACAGAGAACAAGCTGTAGATACTCTATGGAAATATTCACTTGGTGGGAAGAAGTGTATTGACACTTTAATGCAGTTTCCTGGTTGTATTAATCTGACTGTGAACCTCCTTAGATCAGAGTCTAATTCCGCTTGTGAGGCAGCGGCTGGCCTTCTGCGATCACTATCTTCAGTCAATGTATATAGGAATCATGTAGCTGATAGTGGAGCAATAGAAGAGATAAGTAGATTGCTGATGCAACCTTCCTTGGCACCCGAGGTAAAGGAGCAGAGTTTGAGTACACTGTGGAATTTATCTGTTGATGAGAAGCTCTGCACTAAAATTGCAAATAGTGATATTCTGTTGCTTACTATTAAGTATCTCGATGATGAGGATATAAAAGTGAAGGAAGCTGCAGGGGGCATCTTGGCAAATTTAGCATTGAGCCGTGTTAACCATAATATCATGGTTGAAGCAGGTGTTATTCCAAAATTGGCAAAGTTCTTAACATCTAATTCGGAAGGATCTAAAGTCATTAAAAAGGAAGCAAGGAATGCATTGTTGGAACTTGTTAAGGATGAGTATTATAGAATTCTTGTTATTGAGGAAGGTCTGGTTCCTGTGCCACTAGTTGGTGCTGCGGCCTATAAGTCATTCACTCCAAGTTTACATTTGTGGCCGACATTACCAGATGGTTCAGAAATTGAAAGAACCTCTAGACAACCTTCCAGATTTGGTGCATCAGAATTACTTCTTGGATTAAATATAAATGACAAGAATGCTAACATAGAGGAAGCAAAAGCTAATGCAATTATTGGACGGACACAACAGCAATTCCTTGCCCGTATTGGGGCTATAGAAATGGAAGAAAAGACAATACCTAATTCTGAATCCTCAAATGATCTGCGGCTTACACTTTTACCTTGGGTGGATGGTGTTGCTCGTTTGGTACTGATACTAGAACTACAAGATAAGTCTGCGATAGTAAGGGCTGCTGAGTCAATTGCTGGTGCATCTATCAATGAACATATGCGTATTGCATTCAAGGAGGCTGGAGCAGTTAAGCATTTAGTGCGGCTTTTGAATTGTGATGATAATGCGGTACAGTGGGCCGTAATACAAGCTTTGGAAAAGCTGTCTCCTAGCAATGTTGTTTGCCATGTAATTGAAGGTGAGGGTGTTTTAGGTCCTTTAGTTAGTATTTTGAAATGCTCAGAGCCAGATGGAACTATTGTGGAAAAGTCTTTGAACATACTTGCTCGGATATTAGACCCCAGTAAAGAGATGCAATTAAAGTTTTATGATGGACCAGTTAAGGGATCTGAGAAAACATTTGATGGAGCCAAACATGGTGATGATTCAACAGGGTTAAGTGGCACTGAACAAGCTGCATCAAAATCAAATACAAGGAACAATATATTGGATTCTGTTTTCATTGAACACCTTGTTCAGTTTCTGAAGTCCTCTTCACCGAGGGTACAAGAAAAAGCTGCATCTGTGCTCGAGTATGTGGCACTGATTGACTCAACTCTGGCCCCTATTATATCCGTGGATATTGAATCTGGTCTCAATTCTGTTTTCCAGCAAAAAGTTTTGAAAATTTCAGCGGACATGGAATCTGATGTAGAAGATCAGTTCTCTGAAGCATACATAGTCGAATTTCAAGAAGCTGGTCTTGCAATATCTGCAGCATCACGGTTAATGACAAGACTACTCGATTCTGAGCAGTTTCGCCTCAAAATAGATTCTTCCTATTTCATTGGCTTGCTTCTTGAAATCCTCAAGTCCAGTATTCCCCTCCACAACAAAGATTGGGTAGCTGCCTGCCTAGTTAAGCTAAGTTCTGTCTCGGGACACAACACGAAATTTAATCCAATCGACGTCGAAGTTACAATTCATGAGACAATACCAAGACTTATAGAACAGATCAAAACTTCATTCTCTCTGGAAGCACAAGAAGATGCTGTTGTAGAACTTAACAGAATAATATCTGAAGGAGTGGTAGATTTTACAGGAGCTATTATTTCTGAGGGTGCAATATATCCATTGGTGAAGCTGATTCAAGAAGGGAGTGAAAAGGGTGTTGAAGCAAGCTTAGCAATACTTTATAATCTGAGTATGGATAGTGAGAACCATTCAGCACTTGTGGCTGCTGGAATAGTCCCCGTCTTAAGAAGAATTGTTCTAGGAAACAGACCACAGTGGGAAAGAGCACTTCATTTGCTCAGGACTCTGCAAATTTGA 2598 0.4042 MICDATQIQKNPSLFLQNMLASTILLTPSTSNLNLSHFFTTQSPSSQFHQRNPKTIVTLFSKSISKLVVVARVSSNGHDGAIDATSQQQSSPPPGIDTMNSTSSSLGDGYVALFVRMLGLDHDPLDREQAVDTLWKYSLGGKKCIDTLMQFPGCINLTVNLLRSESNSACEAAAGLLRSLSSVNVYRNHVADSGAIEEISRLLMQPSLAPEVKEQSLSTLWNLSVDEKLCTKIANSDILLLTIKYLDDEDIKVKEAAGGILANLALSRVNHNIMVEAGVIPKLAKFLTSNSEGSKVIKKEARNALLELVKDEYYRILVIEEGLVPVPLVGAAAYKSFTPSLHLWPTLPDGSEIERTSRQPSRFGASELLLGLNINDKNANIEEAKANAIIGRTQQQFLARIGAIEMEEKTIPNSESSNDLRLTLLPWVDGVARLVLILELQDKSAIVRAAESIAGASINEHMRIAFKEAGAVKHLVRLLNCDDNAVQWAVIQALEKLSPSNVVCHVIEGEGVLGPLVSILKCSEPDGTIVEKSLNILARILDPSKEMQLKFYDGPVKGSEKTFDGAKHGDDSTGLSGTEQAASKSNTRNNILDSVFIEHLVQFLKSSSPRVQEKAASVLEYVALIDSTLAPIISVDIESGLNSVFQQKVLKISADMESDVEDQFSEAYIVEFQEAGLAISAASRLMTRLLDSEQFRLKIDSSYFIGLLLEILKSSIPLHNKDWVAACLVKLSSVSGHNTKFNPIDVEVTIHETIPRLIEQIKTSFSLEAQEDAVVELNRIISEGVVDFTGAIISEGAIYPLVKLIQEGSEKGVEASLAILYNLSMDSENHSALVAAGIVPVLRRIVLGNRPQWERALHLLRTLQI 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1054 865 MobiDBLite consensus disorder prediction 562 585 - -
Lal6g1054 865 Gene3D - 83 336 IPR011989 -
Lal6g1054 865 Gene3D - 417 638 IPR011989 -
Lal6g1054 865 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 40 864 - -
Lal6g1054 865 SMART arm_5 267 310 IPR000225 GO:0005515
Lal6g1054 865 SMART arm_5 226 266 IPR000225 GO:0005515
Lal6g1054 865 SMART arm_5 785 825 IPR000225 GO:0005515
Lal6g1054 865 SMART arm_5 584 624 IPR000225 GO:0005515
Lal6g1054 865 SMART arm_5 459 499 IPR000225 GO:0005515
Lal6g1054 865 SMART arm_5 182 225 IPR000225 GO:0005515
Lal6g1054 865 Gene3D - 673 864 IPR011989 -
Lal6g1054 865 SUPERFAMILY ARM repeat 749 847 IPR016024 -
Lal6g1054 865 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 194 227 IPR000225 GO:0005515
Lal6g1054 865 SUPERFAMILY ARM repeat 107 646 IPR016024 -
Lal6g1054 865 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 796 838 IPR000225 GO:0005515
Lal6g1054 865 MobiDBLite consensus disorder prediction 79 101 - -
Lal6g1054 865 Pfam Armadillo/beta-catenin-like repeat 187 224 IPR000225 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1054 109 339 U-box Gene Family AT2G23140 30.769 2.40e-08 55.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g1054 6 7652814 7659156 Lal6g1054 6 7652814 7659156 ECH