Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1052 ATGGATAGTATATTGGGTCTTCTGAAACTTCGTATTAAAAGAGGAATTAATCTTGCAATTCGAGATGCTCGTACCAGCGACCCTTATGTTGTTGTTCACTTTGGCGATCAGAAGTTGAAAACTCGTGTCATAAAAAGCAACTGCAATCCTGAGTGGAATGAAGAATTGACCCTTTCTGTTGGAAACGTTGAAACTCCTATACAACTTACAGTTTATGACAAAGACACATTCTCTGTGGATGACAAAATGGGTGATGCAGAAGTAGACATAAAGCCATATATTCAAAGTGTGAAGATGGGGTTGAACAAGCTCCCAAATGGGTGTGCAGTGAAGAGGATTCTACCTAATAGGAATAATTGCCTTGCTGAAGAGAGTAGCTGCATTTGGCACAATGGAAATATCATCCAAGAAATGATTTTAAGATTGAAAAATGTTGAGTGTGGTGAAGTTGTTGTTGAAATTGAATGGGTTGATATTCCAGGTTGCAAGGGCTTATCAGAGGTAGAATTTTAA 513 0.3821 MDSILGLLKLRIKRGINLAIRDARTSDPYVVVHFGDQKLKTRVIKSNCNPEWNEELTLSVGNVETPIQLTVYDKDTFSVDDKMGDAEVDIKPYIQSVKMGLNKLPNGCAVKRILPNRNNCLAEESSCIWHNGNIIQEMILRLKNVECGEVVVEIEWVDIPGCKGLSEVEF 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1052 170 CDD C2_ArfGAP 5 148 - -
Lal6g1052 170 SMART C2_3c 7 102 IPR000008 -
Lal6g1052 170 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 163 IPR044562 -
Lal6g1052 170 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Lal6g1052 170 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 100 IPR035892 -
Lal6g1052 170 Gene3D C2 domain 4 161 IPR035892 -
Lal6g1052 170 Pfam C2 domain 7 92 IPR000008 -
Lal6g1052 170 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 1 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1052 Lal-Chr6 7623241 7627156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1052 38 166 C2H2 Transcription Factor Family AT1G70790 67.939 2.03e-62 187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g1052 6 7623241 7627156 Lal6g1052 6 7623241 7627156 ECH
Lal6g1052 6 7623241 7627156 Lal8g0479 8 3237048 3239338 ECH