Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1022 ATGAAGGAATTTTCTCTTCCTTCTCAACCATCCTCATACGACGCCGTTTACGTTTCCGAACAAGTTCCTATCACTGCGAATGGCTGGGATGGTAAATTTCACACTTCTTCATTACCGGGTGCTTCCCCCAATGATGATACTGCTGAGTGGAAGCAGAAATTAACCATGCTTTTGAACGACAAGAATAAGCAAGAGTTGATATCAAGGGAGAAAAAGGATAGGCGTAATTTTGAGCAATTGGCAGCCTTGGCAAGCAGAATGGGTTTGTATAGCCATTTGTATGTAAAGGTTGTTGTATTCAGCAAGGTTCCACTTCCAAACTATAGGTATGATTTGGACGATCGACGCCCACTGAGGGAGGTGAACCTGCCTATTACTACATTAAGGCGAGTTGATGCATATCTTGAAGAATACCAAAGGCAAAAGTCCAGGATGAAGGAAAGTTTTTCAGATTTGTCCTTTGCAAGATTAAACAGTAACATTGATACAGAGGAACTGCTTTTTAAGCAGCGTAAGCCTTTAGCATCAAATAAAGCTGCTGTGGAGGAAATTCTCAGGCAGAGAAGCTTACAAATGCGTGATCAGCAACAAGCCTGGCAGGAATCTATTGAAGGAAGAAGAATGTTGAAATTTCGTGGTAGACTCCCTGCTTATAAAGAGAAGGAAGCAATATTGTTAGCCATATCAAAGAACCAGGTAATTATCATTTCGGGTGAAACAGGTTGTGGGAAGACAACACAACTCCCACAATTTATTTTAGAATCTGAGGTAGAATTAGTTCGTGGAGCTTTTTGTAATATTATATGCACACAACCCAGACGTATTTCGGCAATTTCGGTTTCTGAAAGGGTTGCTTGTGAGAGAGGGGAGAAGTTAGGTGAATCTGTTGGTTATAAAGTTAGACTGGAGGGTATGAGAGGGAGAGATACCCATCTTCTCTTTTGCACCACAGGCATTTTATTGAGAAGATTACTAGCTGATAGAAACTTAAACGGTGTAACTCACATTATCATGGATGAAATTCACGAGCGCGGGATGAATGAAGATTTTCTGTTTATTGTTCTTAAAGATCTCCTACCCCACCGACCAGAATTGAAATTAATTTTGATGAGTGCCACGCTTGATGCAGAGCTTTTCTCCTCATACTTTAGTGGAGCTGCAATTATTAAGATTCCGGGTTTTACATACCCCGTTCGAACTCATTTTTTGGAGAATATTTTGGAAATGTCGGGCTACAGTTTGACTCATGACAATCAAATTGATGATTACGGCCAAGAAAGGATTTGGAAAATGAACAAACAGACCCCAAGAAAGAAAAAAAGCCAAATTGCTTCTGCTGCAGAGAAATATGACCAGGATGCTGTAAGAACTGCTGATTTCAAAGATTACTGTCTGCAAACACAGGAGTCTTTGTCCTGTTGGAATCCTGACTGTATTGGTTTTAACCTCATAGAGTATATCTTGTGCAATATATGTGAGCATGAAAGGCCTGGTGCTGTTTTGGTTTTCATGATTGGATGGGATGATATAAATGCTCTGAAAGAGAAGCTCCTGATGCATTCTATATTGGGTGATCCAAGCCGAGTTTTGTTGCTTACATGCCATGGCTCAATGGCCAGTTCAGAGCAGAGTTTAATATTTGAAGAAGCTGAAGACGGAGTACGGAAAATAGTGCTAGCGACCAATATTGCTGAAACGAGTATCACTATAAGTGATGTTGTTTTTGTTCTTGACTGTGGAAAGGCAAAAGAATCATCATATGATGCACTGAATAACACACCTTGTTTGCTTCCCACCTGGATCTCAAGGGTTTCTGCTCAACAAAGAAGAGGAAGAGCTGGTCGTGTTCAACCTGGTGAATGTTACCATCTCTATCCTAGATGTGTTCATGATGCTTTCACAGAGTATCAGTTGCCTGAAATTTTGAGGACACCTTTGCAATCTCTCTGTCTGCAAATAAAAAGTTTAAAGCTTGGAAGTATATCCGAGTTCTTGTCTAGGGCTTTACAGTCTCCTGAAATGCTCGCGATTCAAAATGCAATTGAATATTTAAAAATAATTGGAGCTTTTGATGAGAATGAGAATCTGACTATTCTAGGATATTATCTGACAATGCTTCCAATGGAACCCAATCTTGGAAAGATGCTTATATTCGGTGCCATCTTCAATTGCTTGGATCCCATATTAACTGTTGCTGCTGGCCTCAGTGTGAGAGATCCTTTTCTAGCACCGTTGGATAAAAAAGATCTTGCAGAGGCTGCAAAATCTCAGTTCTCCCATGATTACAGTGACCACCTTGCAATTGTGAGGGCTTATGAGGGATGGAAAGATGCTGAAATAGACCTCACTGGACATGAATACTGCTGCAAAAAATTTCTTTCTGCACAATCTATGAAAACCATTGATGCTCTTCGTGCAGAATTCTTATCCTTGCTTAAGGATATTGGATTAGTTGATAGCAATGCAACCGGTTGCAATGCATGGAGTTATGATGTTCATCTTATTCGGGCAGCTATTTGCTATGGTTTATATCCTGGAATTTGCTCTATTGTGCATAATGAGAAGTCATTTTCTCTGAAAACAATGGAAGATGGTCAAGTCCTCCTACATTCGAATTCAGTTAATGCTCGGGAAACTATAATTCCATATCCATGGCTAGTTTTTAATGAGAAGATAAAGGTGAACTCAGTATTTCTCCGTGACTCAACAGCTGTGTCCGATTCACTGGTGCTTCTATTCGGTGGAAGCATCTCAAAAGGAGATGCTGACGGTCACTTAAAAATGTTAGGAGGATATCTTGAGTTTTTCATGGAACCTGCTGTTGCTGACATGTACCAGAGTATAAGGCAAAAACTCGGTGACTGCATTCAGAGCAAACTGCTGTTTCCGATGATGGGCATACATTCATTTCATGAGCTCCTATCTGCTGTACGGTTTCTGATTTCAGACGACAAATGTGAAGGCAGATTTGTATTTGGTTGCCAGATCCTTAAACCATCACAGCCATCTATGATGACCTTGCAGCCAGTATTGGTTTCTAGGACTGAGAGTGGACCCGGGGGTGATAATTCTAAAGGTCAGCTCCAAACTTTGTTGACAAGGGCCGGATTGGCTATGCCGGTCTACAAAACTATGCAATTGAACAATCAGTTTTGTTCTACAGTCGAGTTTAACGGTGTGCAAATAACGGGCCAACCTTGTAACAATAAGAAAACGGCAGAAAAAGATGCTGCGGCTGAGGCACTAGTGTGGCTTATGAATAAAAGACATACTGGGCATGAGTATATCAATCACATGACAGTGTTGCTAAAGAAAAGTAAGAAGGATCACATTTAA 3336 0.4059 MKEFSLPSQPSSYDAVYVSEQVPITANGWDGKFHTSSLPGASPNDDTAEWKQKLTMLLNDKNKQELISREKKDRRNFEQLAALASRMGLYSHLYVKVVVFSKVPLPNYRYDLDDRRPLREVNLPITTLRRVDAYLEEYQRQKSRMKESFSDLSFARLNSNIDTEELLFKQRKPLASNKAAVEEILRQRSLQMRDQQQAWQESIEGRRMLKFRGRLPAYKEKEAILLAISKNQVIIISGETGCGKTTQLPQFILESEVELVRGAFCNIICTQPRRISAISVSERVACERGEKLGESVGYKVRLEGMRGRDTHLLFCTTGILLRRLLADRNLNGVTHIIMDEIHERGMNEDFLFIVLKDLLPHRPELKLILMSATLDAELFSSYFSGAAIIKIPGFTYPVRTHFLENILEMSGYSLTHDNQIDDYGQERIWKMNKQTPRKKKSQIASAAEKYDQDAVRTADFKDYCLQTQESLSCWNPDCIGFNLIEYILCNICEHERPGAVLVFMIGWDDINALKEKLLMHSILGDPSRVLLLTCHGSMASSEQSLIFEEAEDGVRKIVLATNIAETSITISDVVFVLDCGKAKESSYDALNNTPCLLPTWISRVSAQQRRGRAGRVQPGECYHLYPRCVHDAFTEYQLPEILRTPLQSLCLQIKSLKLGSISEFLSRALQSPEMLAIQNAIEYLKIIGAFDENENLTILGYYLTMLPMEPNLGKMLIFGAIFNCLDPILTVAAGLSVRDPFLAPLDKKDLAEAAKSQFSHDYSDHLAIVRAYEGWKDAEIDLTGHEYCCKKFLSAQSMKTIDALRAEFLSLLKDIGLVDSNATGCNAWSYDVHLIRAAICYGLYPGICSIVHNEKSFSLKTMEDGQVLLHSNSVNARETIIPYPWLVFNEKIKVNSVFLRDSTAVSDSLVLLFGGSISKGDADGHLKMLGGYLEFFMEPAVADMYQSIRQKLGDCIQSKLLFPMMGIHSFHELLSAVRFLISDDKCEGRFVFGCQILKPSQPSMMTLQPVLVSRTESGPGGDNSKGQLQTLLTRAGLAMPVYKTMQLNNQFCSTVEFNGVQITGQPCNNKKTAEKDAAAEALVWLMNKRHTGHEYINHMTVLLKKSKKDHI 1111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1022 1111 Gene3D - 482 635 IPR027417 -
Lal6g1022 1111 CDD DEXHc_RHA-like 231 391 - -
Lal6g1022 1111 SMART ha2_5 679 769 IPR007502 GO:0004386
Lal6g1022 1111 SMART helicmild6 511 617 IPR001650 -
Lal6g1022 1111 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 225 392 IPR014001 -
Lal6g1022 1111 Pfam DEAD/DEAH box helicase 222 375 IPR011545 GO:0003676|GO:0005524
Lal6g1022 1111 SUPERFAMILY dsRNA-binding domain-like 1018 1085 - -
Lal6g1022 1111 SMART ultradead3 213 406 IPR014001 -
Lal6g1022 1111 Gene3D - 1004 1091 - -
Lal6g1022 1111 CDD SF2_C_RHA 474 625 - -
Lal6g1022 1111 Gene3D - 165 393 IPR027417 -
Lal6g1022 1111 SMART DRBM_3 1024 1086 IPR014720 -
Lal6g1022 1111 Pfam Helicase conserved C-terminal domain 485 616 IPR001650 -
Lal6g1022 1111 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 220 782 IPR027417 -
Lal6g1022 1111 PANTHER DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH5, MITOCHONDRIAL 21 1037 - -
Lal6g1022 1111 Gene3D - 659 766 - -
Lal6g1022 1111 PANTHER ATP-DEPENDENT RNA HELICASE 21 1037 - -
Lal6g1022 1111 Pfam Helicase associated domain (HA2) 680 754 IPR007502 GO:0004386
Lal6g1022 1111 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 483 657 IPR001650 -
Lal6g1022 1111 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 835 917 IPR011709 -
Lal6g1022 1111 Pfam Double-stranded RNA binding motif 1025 1082 IPR014720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1022 Lal-Chr6 7331163 7354317 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g1022 6 7331163 7354317 Lal6g1022 6 7331163 7354317 ECH