Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1020 ATGTTCCCTTTAGTTCTGTTCCTTTTTCTTTTATACAACTTTCTTGTTGCACCTGTGAACCCTCTAAGCATTGAAGGCACTGTGCTTTTAACACTGAAGAATTCCATCATCAATGACCCAGAAGGTTCTATGAGTAACTGGAACTCTTCTGATGAAACTCCATGTTCATGGAATGGAATCACATGCAACGACCAAAGTGTTGTTTCCATTAGTATTCCAAAGAGCAAACTTTATGGGATTCTACCTTCTGCTATAGGATATCTTTCTCAGCTTCGTCATGTAAATTTCAGAAACAACAACCTCTTTGGGAATTTGCCTAAAAAGCTTTTTGAAGTTCAGGGATTGCAAAGTTTGGTGCTTTATGGTAATTCCTTATCTGGGTCTGTTCCAAATGAGATTGGGAAGCTCAGGTACCTTCAAACTCTAGATTTATCACAAAATTTCTTTACTGGGTCTTTACCTGCTACAATTGTTCAATGCAAGAGGCTCAAAGCACTTGTTCTGAGTCATAATAATTTTAGTGGTACTTTGCCAGATGATGGATTTGGTAGTAATTTGCTTTCTTTGGAAAAACTTGATCTTTCTTTCAATCAGTTCAATGGTTCAATTCCCAGTGATATTGGAAATTTGTCAAGTTTGAAAGGAACTGTTGATTTGTGTCATAATCATTTTAGTGGTTCAATCCCACCAAGTCTTGGTAATTTGCCTCAGAAGGTTTACATTGATCTATCTTACAATAATTTAAGTGGACCAATACCCTTAACTGGTGCTTTAATGAATAGAGGACCAACTGCTTTTATTGGCAATTCTGGTCTATGTGGCCCTCCTTTGAAGAATCCATGTGCATTGTATACTCCTGGTTCTGCTATTGCACCTTCCTCATTTCCATTTTTGCCTGATAATTACCCATCTCAAGGTAATGGTTCTGGGAAAAGTGAGAAAAACAAAGGGCTAAGTAAGGGAGCTATGATTCTCATTGTTGTAGGTGATATAATTGGGATTTGCATTTTTGGTTTGGTGTTCTCTTACTTCTATTCAAAGGTTTGTGGTTTTGACCAGGATCAGAATGAGAATTGTATTGAGAAGGAAGGGGTAGTTATGAGGAAAAAGTTCTTGTGTTTCAGAAAGGGTGAGTCTGAGACCCTATGTGATCATGTTGAGCAATATGATCTTGTTCCATTGGATACTCAAGTGGCTTTTGACTTGGATGAGCTTCTTAAGGCTTCAGCTTTTGTTCTCGGAAAGAGTGGAATAGGGATTGTATACAAAGTTGTGCTTGAAGACGGGCTTACCTTGGCCGTGAGAAGATTGGGGGAGGGAGGTTGTCAAAGGTTTAAAGATTTCCAAACTGAAATTGAAGCAATTGGAAAGTTAAGGCATCCTAATGTTGTTACTTTGAGAGCTTATTACTGGTCTGTTGATGAGAAACTTCTCATCTATGATTACATTCCCAATGGAATCCTTGCTACCGCAATTCACGGGAAGGCTGGACTTGTGACATTCACGCCATTATCTTGGTCGGATCGAATGAAAATCATGAAAGGAATTGCAAAAGGATTGGTCTACTTGCATGAGTTTAGCCCCAAAAAATATGTCCATGGAGACCTGAAGCCGAGTAACATACTACTAGGCCATAACATGGAACCTCACATTTCTGATTTCGGTCTTGGACGGCTTGCCAATATTGCCAGTAGAGGGTCTCCAACCTTGCAATCTAACCATATGTCTGCAGAGATACAAGAAGAAAGACAAAATAGCTTATCCACAGAAACCACAGCTAATATTTTGGGCAATGGTTATCACGCTCCAGAGACATTGAAAGCGGTGAAGCCATCACAAAAGTGGGATGTGTATTCATTTGGTGTGGTCTTGCTAGAAATGATTACAGGACGATTGCCGATTGTCCAAGTTGGTAACTCAGAAATGGACCTTGTTCAATGGATTCAGTTCTGCATAGATGATAAGAAGCCTCTCTCAGATGTGTTAGACCCGTATTTAGAAGACGATTCGGATAAGGAAGAGGACATTATTGCAGTTTTGAAGATTGCAATTGCTTGTGTAAATAGCAGCCCGGAAAAAAGACCAATAATGAGGCATGTGCTTGATGTTTTGGATAGATTGTCCATATCCTCTGACCAAGAATCCTTATGTTGA 2154 0.3932 MFPLVLFLFLLYNFLVAPVNPLSIEGTVLLTLKNSIINDPEGSMSNWNSSDETPCSWNGITCNDQSVVSISIPKSKLYGILPSAIGYLSQLRHVNFRNNNLFGNLPKKLFEVQGLQSLVLYGNSLSGSVPNEIGKLRYLQTLDLSQNFFTGSLPATIVQCKRLKALVLSHNNFSGTLPDDGFGSNLLSLEKLDLSFNQFNGSIPSDIGNLSSLKGTVDLCHNHFSGSIPPSLGNLPQKVYIDLSYNNLSGPIPLTGALMNRGPTAFIGNSGLCGPPLKNPCALYTPGSAIAPSSFPFLPDNYPSQGNGSGKSEKNKGLSKGAMILIVVGDIIGICIFGLVFSYFYSKVCGFDQDQNENCIEKEGVVMRKKFLCFRKGESETLCDHVEQYDLVPLDTQVAFDLDELLKASAFVLGKSGIGIVYKVVLEDGLTLAVRRLGEGGCQRFKDFQTEIEAIGKLRHPNVVTLRAYYWSVDEKLLIYDYIPNGILATAIHGKAGLVTFTPLSWSDRMKIMKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHISDFGLGRLANIASRGSPTLQSNHMSAEIQEERQNSLSTETTANILGNGYHAPETLKAVKPSQKWDVYSFGVVLLEMITGRLPIVQVGNSEMDLVQWIQFCIDDKKPLSDVLDPYLEDDSDKEEDIIAVLKIAIACVNSSPEKRPIMRHVLDVLDRLSISSDQESLC 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1020 717 Gene3D Transferase(Phosphotransferase) domain 1 483 716 - -
Lal6g1020 717 ProSitePatterns Serine/Threonine protein kinases active-site signature. 531 543 IPR008271 GO:0004672|GO:0006468
Lal6g1020 717 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 3 711 - -
Lal6g1020 717 Gene3D Ribonuclease Inhibitor 23 181 IPR032675 -
Lal6g1020 717 SUPERFAMILY L domain-like 26 278 - -
Lal6g1020 717 Gene3D Phosphorylase Kinase; domain 1 380 482 - -
Lal6g1020 717 ProSiteProfiles Protein kinase domain profile. 407 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g1020 717 Gene3D Ribonuclease Inhibitor 182 283 IPR032675 -
Lal6g1020 717 SMART serkin_6 412 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g1020 717 CDD STKc_IRAK 413 707 - -
Lal6g1020 717 SUPERFAMILY Protein kinase-like (PK-like) 412 704 IPR011009 -
Lal6g1020 717 Pfam Leucine rich repeat 114 173 IPR001611 GO:0005515
Lal6g1020 717 Pfam Leucine Rich Repeat 188 210 IPR001611 GO:0005515
Lal6g1020 717 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Lal6g1020 717 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 3 711 - -
Lal6g1020 717 Pfam Protein kinase domain 413 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1020 Lal-Chr6 7309996 7312797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1020 4 712 Receptor kinase-like Gene Family AT2G01210 65.369 0.0 951
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal6g1020 Pkinase 4.2e-33 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g1020 6 7309996 7312797 Lal6g1020 6 7309996 7312797 ECH