Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0806 ATGGAAAAAGACGAAGACAAACCTCTACAACCACCACCCCATCCTTCTGCAACAACCGCTGAGTTCGCCGGCGAGTCGAGCTGGCCGCTAGGCGCTGATGACTCTGACGGTTCTTATTTCTACTCCGTCGACAGGAACAGGAGCATACTGAGCGATTTCGGATGGAACCTCGACCCGGTCCAGTCGAACCGGATCGACTCAGACGTGGACGGATTGTGGGTTCCGGCTCACTCTGATCTGACCGGTTCGGTTGTTGAACCTATCGGTTCAGCTGCGGCTGCGGGAACAACGTCGAGGTCGAATAATCAATCGGTGTCTACGAGCTCCAGCGAGGATCCGCCTGAGAAATCCACCGTCTCCGACGAGAAACCGCCGCATGAGATTCCGAGGAAGAGTAAGAAGAAAGGGCAAAAGCGTATACGGCAGCCACGGTTTGCATTTATGACAAAGAGTGATGTTGATCATCTTGAGGATGGCTACAGATGGCGCAAGTATGGTCAAAAGGCAGTTAAAAATAGTCCATTTCCTAGGAGCTACTATCGTTGCACAAACAGCAAATGCATGGTGAAGAAAAGGGTTGAACGATCATCGGAGGACCCAAGTACTGTAATTACTACATATGAAGGCCAACACTGTCATCACACCGTTGGTTTTCCTCGAGCAGGAATCATTAGTCATGAATCTCCCTTTGCCCCTTGTCACTTGGCTCCAACTATGTCACACATATATTATCCTGTTCACATGCAAAGAGATGAAAATGCTACTTTTAGCAGTAGTAGTGTTTCTCAGCCTTTTCAAACACAGAATGAAGTTGGAGGATCCAGAAATGTAATAGTAGCTGATGATGAATTGCAACATCCTCCCATTGATGAAGGACTACTAGGAGACATTGTACCTCCTGGAATGCGCAACAGATGA 918 0.4826 MEKDEDKPLQPPPHPSATTAEFAGESSWPLGADDSDGSYFYSVDRNRSILSDFGWNLDPVQSNRIDSDVDGLWVPAHSDLTGSVVEPIGSAAAAGTTSRSNNQSVSTSSSEDPPEKSTVSDEKPPHEIPRKSKKKGQKRIRQPRFAFMTKSDVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCMVKKRVERSSEDPSTVITTYEGQHCHHTVGFPRAGIISHESPFAPCHLAPTMSHIYYPVHMQRDENATFSSSSVSQPFQTQNEVGGSRNVIVADDELQHPPIDEGLLGDIVPPGMRNR 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0806 305 MobiDBLite consensus disorder prediction 115 129 - -
Lal6g0806 305 Pfam WRKY DNA -binding domain 157 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal6g0806 305 PANTHER WRKY TRANSCRIPTION FACTOR 57-RELATED 18 229 - -
Lal6g0806 305 SUPERFAMILY WRKY DNA-binding domain 148 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal6g0806 305 Gene3D WRKY domain 143 209 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal6g0806 305 ProSiteProfiles WRKY domain profile. 151 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal6g0806 305 SMART WRKY_cls 156 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal6g0806 305 MobiDBLite consensus disorder prediction 88 145 - -
Lal6g0806 305 MobiDBLite consensus disorder prediction 1 39 - -
Lal6g0806 305 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 18 229 IPR044810 GO:0003700
Lal6g0806 305 MobiDBLite consensus disorder prediction 93 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0806 Lal-Chr6 5410457 5417649 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal6g0806 WRKY 2.1e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0806 6 5410457 5417649 Lal6g0806 6 5410457 5417649 ECH