Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0798 ATGGCGTCGCAACTTGCGATCCTCTCTCGCTCCCTCCTCCGCCACAAACCCCACTCCATCAGAACCATCTCCACCTTCCCTTTCCTCTCCCAAGAGCCCCAACTCGCCGACCCCATTTCACCATCCCCAACCACCACCACCACCACCACCACCACCACCACCTCCCTCCCTCCAAACCCTGCCTCCGGTTCCCCTCTCTACAACGAGAACTGGCGTAGCCCCATTCCCCCCACCTCCTTATCCCCTTCCTCCATCATCCCCGTCGGATTCTTCAACAACCCCTCATTCCGCGCTCCCAATTCTTTCTCCGATGACACATATGACTCGCAGACGCTACTCAATCACTTCGCCGATTGGACTGCGTCGCAGCGGTGGGATGATATGAAGAATCTCTTTGAGGCGTGGGTTAAGTCGCTGGATAGGAATGGAAAACCTAATAAGCCTGATGTTGATCTTTATAACCATTATTTGAGGGCTAGTTTGATGATCGGAGCTTCTGCGGCGGAATTGCTTGACCTCGTTGCGCAGATGGATGAGTTTGGGATTAAACCTAACACTGCGTCGTTTAATTTGGTGCTTAAGGCTATGCACCAGGCTAATGAAACTCTTGCTGCTGAGAAATTGCTCGAACGGATGCTTCAGACTGGAAATGAATCTCTTCCTGATGATGAATCATATGACCTGATCATTGGAATGCACTTTTTGACAGACCAGATTGATGTTGCATTCAAATATATAGATTTAACTTTGAAATCTGGTTACACGTTGTCAATGAAGGTATTTATGGACTGCGTGAGGAGTTGTGTCAATAAGGGCAGGCTTGATACATTGGTGACAATAATTGAAAGGTGCAAGACAAAAGATCAGAACAAAGCTCTTTGCCCTTCCTGGAGCATGTGCCATTTTATAACTGAAGAGGCACTTCGAAAGGATAATAGCAAGTTAGCTTTTTATGGACTGGAGTTTATGGCTAGGTGGATGGTAAAGGGTGAACGTGCAAGGCCTGCTGTTTTGCTTTCTGTAGATGAAGGTTTAGTTGTGTCAGCTCTTGTGACTGCAGGTAGAACCTATAATTCTGAGTTGCTAGGGGCAGCATGGGCTGTTTTGGACCGCTCATTGCGTAAAAAAAAAGCTCCTAATCCAGAATCATATCTTGCAAAGATATATGCCCATGCATCATTGGGGAATCTACAAAAGGCTTTTGCCACTTTACATGAGTATGAGTCTGCTTATGGAGATTCCTGCGAAGAAGCTGAAGACTTGTTCAGCCCATTTACTTCTTTACATCCATTGGTTGTGGCATGCTCCAAGAAGGGTTTTGAGACCTTGGACACTGTTTATTTTCAACTGGAGAATTTAAGCCGGGCAGAGCGTCCTTATAAATCAGTTGCTGCACTGAACTGCGTCATTGTAGGGTGTGCAAATGTATGTGACCTTGATCGTGCTTATCAAACTTTTGAATCAATTGGGTCTGCCTTTGGGTTGACCCCTGATATTCATTCATACAATGGGCTGATGCATGCCTTTGGGAAGCTCAAGAAGACACATGAAGCTACAAGGGTGTTTGAGCACCTAGCGAGTTTGAATGTTAAGCCTAATGCAAAGTCATATTCGCTGCTTGTTGATGCCCACCTGATTAATCGGGATGTCAAATCTGCTCTTGCAGTTATTGATGATATGATAGCAGCTGGATTTGAACCGACAAAGGAGACATTAAGAAAGGTTAGAAGACGGTGTATGCGAGAGATGGACTATGAAAGTGATGACCGCGTGCAATCACTGGCCAAATCTCTCAATATCCGAATAGGTGGAGAAGCCCGCCGGGACATACTGTTCAATCTTGATTACAGTATGGGTTATGCTTGA 1866 0.4598 MASQLAILSRSLLRHKPHSIRTISTFPFLSQEPQLADPISPSPTTTTTTTTTTTSLPPNPASGSPLYNENWRSPIPPTSLSPSSIIPVGFFNNPSFRAPNSFSDDTYDSQTLLNHFADWTASQRWDDMKNLFEAWVKSLDRNGKPNKPDVDLYNHYLRASLMIGASAAELLDLVAQMDEFGIKPNTASFNLVLKAMHQANETLAAEKLLERMLQTGNESLPDDESYDLIIGMHFLTDQIDVAFKYIDLTLKSGYTLSMKVFMDCVRSCVNKGRLDTLVTIIERCKTKDQNKALCPSWSMCHFITEEALRKDNSKLAFYGLEFMARWMVKGERARPAVLLSVDEGLVVSALVTAGRTYNSELLGAAWAVLDRSLRKKKAPNPESYLAKIYAHASLGNLQKAFATLHEYESAYGDSCEEAEDLFSPFTSLHPLVVACSKKGFETLDTVYFQLENLSRAERPYKSVAALNCVIVGCANVCDLDRAYQTFESIGSAFGLTPDIHSYNGLMHAFGKLKKTHEATRVFEHLASLNVKPNAKSYSLLVDAHLINRDVKSALAVIDDMIAAGFEPTKETLRKVRRRCMREMDYESDDRVQSLAKSLNIRIGGEARRDILFNLDYSMGYA 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0798 621 Pfam Pentatricopeptide repeat domain 147 196 IPR002885 -
Lal6g0798 621 Gene3D Tetratricopeptide repeat domain 118 320 IPR011990 GO:0005515
Lal6g0798 621 Pfam PPR repeat family 497 543 IPR002885 -
Lal6g0798 621 TIGRFAM PPR: pentatricopeptide repeat domain 536 568 IPR002885 -
Lal6g0798 621 TIGRFAM PPR: pentatricopeptide repeat domain 500 534 IPR002885 -
Lal6g0798 621 Gene3D Tetratricopeptide repeat domain 442 597 IPR011990 GO:0005515
Lal6g0798 621 PANTHER OS07G0599000 PROTEIN 1 621 IPR044605 -
Lal6g0798 621 MobiDBLite consensus disorder prediction 32 66 - -
Lal6g0798 621 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 533 567 IPR002885 -
Lal6g0798 621 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 498 532 IPR002885 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0798 6 5360902 5366880 Lal6g0798 6 5360902 5366880 ECH