Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0765 ATGGCTTTTATGTCTGAGGTCAACATGAGCAGCTTCTCTCATTACATGGATGATGAATATGAGAAACTATTTCGCAGAGTGAATCCACCAAGAGTTGTAATTGATAACGATGTCTGCAAGAATGCCACTGTTATAAGGGTTGATAGTGCAAACAAGAATGGAATACTTCTTGAAGTTGTTCAAATCCTCACTGATCTAAACCTCATAATAACCAAAGCTTACATTTCTTCTGATGGTGGATGGTTCATGGATGTTTTTAATGTTACTGGCCAAGATGGAAACAAAGTTACAGATGATGCTATTCTGGGTTACATTACAAAGTCTCTTGGCCCTGAGTCTTGTGTTACATCTCCAGTTAGATCTGTTGGGGTGAAACAAACAATGGACCACACTGCAATTGAGTTATTAGGGAGTGATAGGCCCGGGCTTATTTCGGAAGTGAGTGCTGTTCTAACAAATCTCAAGTGCAACATATTGAATGCAGAGGTATGGACTCACAATGCGCGCGCAGCGGCTGTGATGCATGTTAATGATGAAGACACAGGATCTGCAATCACTGATCCTCAAAAACTATCTGTAATTAAAGAGCTCCTATGCAATGTGCTTGGTGTTGGCAACAAGAAGAGGGTTGCAAAAACTGTTGTCACTGATGAAGTCACACATACTGAGAGAAGGCTTCATCAAATGCTGTTTGCTGATAGGGATTATGACAGAGTTAGTGATGATGACTTTGATGAGAAGCAAAGACCAAATGTGAATGTTGTGAATTGGTCGGACAAGGATTACTCTGTGGTTACTATCCAATCTAAGGATAGACCAAAGCTTTTGTTTGACACAGTTTGTACTTTAACAGACATGCAGTATGTGGTTTTTCATGCAAATATTGATGCTGAGGGGCCAGAAGCATATCAGGAATATTACATCAGACATATAGATGGTTCCCCTGTAAAGTCAGATGCAGAAAGACAAAGAGTGATTCAATGTCTTGAAGCTGCAATTGAAAGAAGAGTTTCTGAGGGTTTGAAACTAGAACTTTGCACAACCGATAGAGTTGGACTACTATCCGATGTCACACGCATCTTTCGAGAGAACAGCCTCACCGTTACCAGGGCCGAAGTAACAACTAAAGGCAACAAAGCGGTTAACACTTTCTATGTTCGTGGTGCTTCTGGTTGCATTGTTCATCCAAAGACAATAGATTCCATTCGCCAAGTAATAGGAAACACTATACTTCAAGTAAAGGGTTGTCTTGACGAATCAAAATCTGTTCCTCAAGATTCTCCAACAAGATCTTTCTTTGGTGGCCTCTTCAAATCTAGATCCTTTGTTAACTTTGGATTGGTCAAGTCTTATTCTTGA 1359 0.4025 MAFMSEVNMSSFSHYMDDEYEKLFRRVNPPRVVIDNDVCKNATVIRVDSANKNGILLEVVQILTDLNLIITKAYISSDGGWFMDVFNVTGQDGNKVTDDAILGYITKSLGPESCVTSPVRSVGVKQTMDHTAIELLGSDRPGLISEVSAVLTNLKCNILNAEVWTHNARAAAVMHVNDEDTGSAITDPQKLSVIKELLCNVLGVGNKKRVAKTVVTDEVTHTERRLHQMLFADRDYDRVSDDDFDEKQRPNVNVVNWSDKDYSVVTIQSKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPEAYQEYYIRHIDGSPVKSDAERQRVIQCLEAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVTRAEVTTKGNKAVNTFYVRGASGCIVHPKTIDSIRQVIGNTILQVKGCLDESKSVPQDSPTRSFFGGLFKSRSFVNFGLVKSYS 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0765 452 CDD ACT_ACR_3 262 336 - -
Lal6g0765 452 ProSiteProfiles ACT domain profile. 342 428 IPR002912 -
Lal6g0765 452 ProSiteProfiles ACT domain profile. 132 212 IPR002912 -
Lal6g0765 452 SUPERFAMILY ACT-like 338 406 IPR045865 -
Lal6g0765 452 ProSiteProfiles ACT domain profile. 44 123 IPR002912 -
Lal6g0765 452 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-LIKE ISOFORM X1 13 450 - -
Lal6g0765 452 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 13 450 IPR040217 -
Lal6g0765 452 SUPERFAMILY ACT-like 39 106 IPR045865 -
Lal6g0765 452 Pfam ACT domain 43 97 IPR002912 -
Lal6g0765 452 Pfam ACT domain 132 184 IPR002912 -
Lal6g0765 452 Gene3D - 130 217 - -
Lal6g0765 452 SUPERFAMILY ACT-like 127 200 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0765 Lal-Chr6 5126446 5130170 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0765 6 5126446 5130170 Lal6g0765 6 5126446 5130170 ECH
Lal22g0673 22 4765393 4769464 Lal6g0765 6 5126446 5130170 LSH
Lal6g0765 6 5126446 5130170 Lal18g0943 18 12279511 12282661 LSH