Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0757 ATGAGAGCAGGGAAAGGGAACATGGAAGAGGACGAGTACGAGGAAGATGAGTTCGGTTCTTCTAAGAAACAAGGCAATTCCTCTGCCCCTAACCCCAATAACACCAACAAAGATGCAAAAGCTGTTGATAAGGCTAGTGCAATAAGATCAAAACATTCGGTAACTGAGCAGCGAAGAAGGAGCAAGATAAACGAGAGGTTCCAGATATTAAGGGATCTCATACCTCAATGTGATCAAAAGAGGGACACAGCATCCTTCTTATTAGAGGTGATTGAATATGTTCAGTACTTACAGGAGAAGGTACAAAAGTATGAAGGTTCATATCCAGGTTGGAGTCCTGAGCCCTCAAAATTGATGCCATGGAGAAATAGTCATTGGCGTGTCCAAAACTTTGTTGGGCAACCTCAAGCTGTAAAGAATGGTTCAGGTCCGGTATCACCTTTTCCTGGAAAGTTTGATGAAAGCAATACTAGTATCTCTCCAACCATGCCTTGTGGGAGTCACAATATGATAGATCCTGATCAGAGCAGGGATATTGCCAACAAAATAACAGAGAGGCAACCTGATTTAGCTAGCAAGGGACTACCTCTACCCATGGCTATGCACTCCAACATGCCAGTTCCTGTCAGAAGTGATGATGTACTTGCTCATCCTCTTCAAGGAACTGTTTCTGATGCACAATCAATTGAATATCCAGTCACTAGTGAACCACAGACCCTGCAGGAAGAACTGACAGTTGAAGGAGGGACTATAAGCATCTCTAGTCTATACTCCCAAGGGTTGCTTAATAATCTGACTCAAGCACTACAGAGTGCTGGTATAGATCTATCACAGGCTCGCATCTCAGTTCAGATTAATCTTGGGAAGCGAGCAAATGAAGGACTGAGTTGTGGAACCTCTTCTCCCAAGAATCATAATAACATCCCTTCTAGCAACCAAGGAATTGCACATTTTAGAGATGCAGGCAGTGCAGAAGACTCAGATCAAGCTCAAAAACGAAAGAGAACAGCATAG 1014 0.4339 MRAGKGNMEEDEYEEDEFGSSKKQGNSSAPNPNNTNKDAKAVDKASAIRSKHSVTEQRRRSKINERFQILRDLIPQCDQKRDTASFLLEVIEYVQYLQEKVQKYEGSYPGWSPEPSKLMPWRNSHWRVQNFVGQPQAVKNGSGPVSPFPGKFDESNTSISPTMPCGSHNMIDPDQSRDIANKITERQPDLASKGLPLPMAMHSNMPVPVRSDDVLAHPLQGTVSDAQSIEYPVTSEPQTLQEELTVEGGTISISSLYSQGLLNNLTQALQSAGIDLSQARISVQINLGKRANEGLSCGTSSPKNHNNIPSSNQGIAHFRDAGSAEDSDQAQKRKRTA 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0757 337 Pfam Helix-loop-helix DNA-binding domain 49 98 IPR011598 GO:0046983
Lal6g0757 337 CDD bHLH_AtBIM_like 46 122 - -
Lal6g0757 337 MobiDBLite consensus disorder prediction 321 337 - -
Lal6g0757 337 MobiDBLite consensus disorder prediction 22 40 - -
Lal6g0757 337 MobiDBLite consensus disorder prediction 42 60 - -
Lal6g0757 337 MobiDBLite consensus disorder prediction 1 60 - -
Lal6g0757 337 SMART finulus 53 103 IPR011598 GO:0046983
Lal6g0757 337 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 45 118 IPR036638 GO:0046983
Lal6g0757 337 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 47 97 IPR011598 GO:0046983
Lal6g0757 337 PANTHER TRANSCRIPTION FACTOR BIM2 1 336 - -
Lal6g0757 337 MobiDBLite consensus disorder prediction 296 337 - -
Lal6g0757 337 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 1 336 IPR044295 GO:0003700|GO:0006351|GO:0046983
Lal6g0757 337 Gene3D - 45 110 IPR036638 GO:0046983
Lal6g0757 337 MobiDBLite consensus disorder prediction 296 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0757 Lal-Chr6 5059236 5070021 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0757 1 304 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 57.237 9.92e-111 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lal6g0757 HLH 2.4e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0757 - - lang:109361152 649.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0757 6 5059236 5070021 Lal6g0757 6 5059236 5070021 ECH
Lal22g0667 22 4727281 4732295 Lal6g0757 6 5059236 5070021 LSH