Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0738 ATGGAAAAGAGAGGAGATATAGCTTTCTTTTGTTTAGCTTTGTTCTTCTTGTGGACTTCAGTTTCTGGTTTGCTTAATCCTAAAGGTGTCAACTATGAAGTTGAAGCTCTTATGGCCATAAAGTATTCACTGAAGGATCCTCATTCTGTATTAAGTAACTGGGATGATGATGCTGTGGATCCTTGTAGTTGGGCTATGGTGACTTGTTCTTCTGATCATTTTGTAATTGCCTTAGGGATTCCAAGTCAGAATATATCTGGTACTCTCTCACCAAGCATAGGCAACTTAACAAACCTCCAAACTGTGCTCATGCAGGATAATAATATTACAGGACCAATCCCCTCTGACATTGGAAAGCTCCAAAAACTTCAAACTCTTGATCTTTCTGACAATTTCTTCATTGGTCAACTTCCAGATTCTTTGTCCAACATGAAGGGTCTCCATTATTTGCGTCTAAACAATAATAGTCTCTCTGGAACAATTCCTTCATCTTTGGCAAATATGACTCAGCTTGCCTTTCTGGATATCTCTTACAATAACCTGAGTGGACCTGTACCTAGATTAAATGCAAAAACATTCAATATTGTAGGCAACCCCCAGATATGTGCCACTGGAATTGAAGAAAACTGTTTTAGAACAACTCTGATTCCTTCTGTCATGAACAATTCTCAAGATCAACACCGTGAAGAGCTTTGTTTAGGAAACCTCAAAAAGTTCCATTTTAGAGAACTTCAGGTTGCTACAAATAACTTCTGCAGCAAGAACTTGATTGGGAAAGGTGGTTTTGGAAATGTCTACAAAGGTTATCTCTCAGATGGTTCAGTCATAGCAGTAAAGAGGCTTAAAGATGGCAATGCTATTGGAGGTGAGATCCAATTCCAGACTGAAGTTGAGATGATCAGCTTAGCCGTCCATCGGAATCTTCTTCGACTGTATGGATTTTGCATGACAGCTACAGAGAGGCTCTTGGTTTATCCTTACATGTCAAATGGCAGTGTTGCTTCTCGTCTAAAAGCCAAACCAGCTTTGGATTGGAATACAAGAAAAAAGATAGCATTAGGAGCTGGAAGAGGCTTGCTATATTTGCATGAGCAGTGTGATCCTAAAATTATTCATAGGGATGTGAAGGCTGCGAATATCTTGCTTGACGATTATTGTGAGGCTGTGGTTGGAGATTTTGGATTGGCAAAGCTATTGGATCACCAAGATTCACACGTGACAACAGCGGTAAGAGGCACTGTAGGGCACATAGCCCCTGAGTATCTCTCAACAGGCCAATCCTCTGAGAAAACCGATGTCTTTGGGTTTGGAATCCTTCTACTTGAATTGATTTCTGGGCAAAGAGCTCTTGAATTTGGGAAAGCAGCAAACCAAAAAGGAGCAATGCTTGACTGGGTGAAGAAAATCCATAAAGAGAAGAAAATAGATTTGTTAGTTGACAAGGACTTGAAAAAAAACTATGATAGGATAGAGCTAGATGAAATTGTTCAAGTAGTTCTTTTATGTACTCAATACCTTCCAAGCCATAGACCCAAGATGTCTGAAGTAGTTAGGATGCTTGAAGGAGATGGTCTTGCAGAGAAATGGGAAGCTTCACAAAGAGCTGAATCAACAAGAAGTAGAGGAAATGAACTCTCTTCTTCAGAGCACTACGCCGATCATACCGATGATTCTTCATTACTTGCTCAAGCAATGGAACTTTCTGGACCAAGATGA 1716 0.4003 MEKRGDIAFFCLALFFLWTSVSGLLNPKGVNYEVEALMAIKYSLKDPHSVLSNWDDDAVDPCSWAMVTCSSDHFVIALGIPSQNISGTLSPSIGNLTNLQTVLMQDNNITGPIPSDIGKLQKLQTLDLSDNFFIGQLPDSLSNMKGLHYLRLNNNSLSGTIPSSLANMTQLAFLDISYNNLSGPVPRLNAKTFNIVGNPQICATGIEENCFRTTLIPSVMNNSQDQHREELCLGNLKKFHFRELQVATNNFCSKNLIGKGGFGNVYKGYLSDGSVIAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCMTATERLLVYPYMSNGSVASRLKAKPALDWNTRKKIALGAGRGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGQRALEFGKAANQKGAMLDWVKKIHKEKKIDLLVDKDLKKNYDRIELDEIVQVVLLCTQYLPSHRPKMSEVVRMLEGDGLAEKWEASQRAESTRSRGNELSSSEHYADHTDDSSLLAQAMELSGPR 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0738 571 Gene3D Phosphorylase Kinase; domain 1 220 327 - -
Lal6g0738 571 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Lal6g0738 571 ProSitePatterns Serine/Threonine protein kinases active-site signature. 370 382 IPR008271 GO:0004672|GO:0006468
Lal6g0738 571 ProSitePatterns Protein kinases ATP-binding region signature. 257 279 IPR017441 GO:0005524
Lal6g0738 571 SMART serkin_6 251 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0738 571 Gene3D Ribonuclease Inhibitor 30 212 IPR032675 -
Lal6g0738 571 MobiDBLite consensus disorder prediction 530 571 - -
Lal6g0738 571 SUPERFAMILY Protein kinase-like (PK-like) 226 521 IPR011009 -
Lal6g0738 571 Gene3D Transferase(Phosphotransferase) domain 1 328 540 - -
Lal6g0738 571 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 224 571 - -
Lal6g0738 571 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 6 222 - -
Lal6g0738 571 SUPERFAMILY L domain-like 32 195 - -
Lal6g0738 571 Pfam Leucine rich repeat 122 181 IPR001611 GO:0005515
Lal6g0738 571 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 6 222 - -
Lal6g0738 571 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 224 571 - -
Lal6g0738 571 Pfam Protein kinase domain 254 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0738 571 ProSiteProfiles Protein kinase domain profile. 251 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0738 Lal-Chr6 4918307 4922606 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lal6g0738 Pkinase 5.6e-44 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0738 6 4918307 4922606 Lal6g0738 6 4918307 4922606 ECH
Lal13g1736 13 16948051 16952879 Lal6g0738 6 4918307 4922606 PCT
Lal6g0738 6 4918307 4922606 Lal13g1736 13 16948051 16952879 PCT