Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0721 ATGAAGGATGATGGTAAGGTAACGAAGCAATTGAATCTGAGCAAGATCTACTCATTCGCATGTGGCAAACAATCTTTCAAGGGAGAACATCGACAAATCGGAGGGCCCGGCTATTCGAGGGTAGTGTTGTGCAATGAGCTAGATAACTTTGAAGTTTGGCTTAGGGACTATGCAGATAATGCTGTGAGGTCTACTAAGTATACCATTGCTACCTTCTTACCCAAGTCACTGTTTGAGCAGTTTAGGAGAGTAGCTAATTTCTATTTCTTGGTGACTGGTATCTTGTCCTTCACAGAACTTGCTCCTTATACAGCTGGTAGTGCTATTCTTCCTTTGATTGTTGTTATTGGAGCAACTATGATTAAAGAGGGTATTGAAGATTGGCGTAGGAAAAAACAGGATATTGAAGTGAACAATAGAAGAGTTAAAGTGCATAAAGGGGATGGAACTTTCGAATATACTGAGTGGAAGAATCTGAGGGTGGGGCATATAGTAAAGATTGAGAAGGATGAATTCTTCCCTGCTGATCTCCTACTGCTATCATCCAGCTATGAGGATGCAGTCTGCTATGTCGAGACAATGAACTTGGACGGGGAAACAAATTTGAAGCTGAAACAAGGGTTGGAAGTAACTTGTTCCTTACACGAGGACTTCAAGTTCCGCGATTTCAAGGCTACAATCAAATGTGAAGATCCAAATCCAAATTTGTATTCATTTATTGGGAGCATAGAGTTTGAAGAGAAACAATATCCCCTTTCTCTTCAGCAACTTCTTCTGAGAGACTCTAAACTTCGTAATACAGATTATGTATTTGGAGCTGTTGTCTTCACTGGTCATGATACGAAGGTTATTCAAAATTCTACCGATCCTCCTTCGAAGAGAAGCAAAGTTGAGAGGAAGATGGATAGAGTTATCTACTTCTTGTTTTGTATTTTATTTCTAATGGCATTTGTTGGATCTATTTTCTTTTGCATTATAACTAAAGATGACTTGGACAATGATGTGATGAAAAGGTGGTATCTCAGACCAGATGATTCTACAATTTTCTTTGATCCTAGAAGAGCACCAGCTGCTGCTTTATATCATTGTTTGACAGCTTTGATGTTATATGGCTTCTTTATTCCCGTATCACTGTATGTATCAATTGAGTTTGTCAAAGTACTTCAGAGCATCTTCATCAATCAAGATATCCATATGTACTATGAAGAAGCGGACAAAGCTGCTCATGCCCGTACTTCAAACTTGAATGAGGAACTTGGCCAAGTTGACACAATACTTTCTGATAAAACTGGAACTCTGACATGCAACTCAATGGAATTCATCAAATGTTCCATTGCTGGGGTAGCTTATGGTCGTGGTGTTACAGAAGTTGAGACGGCCATGAATAGAAGAAATGGATCACCTGCGATCGATGAGAATGTTAATCTATCAAAATCAGGTGATATAAGGGAATCTCCTGATAGTAGAGCATCTGTCAAAGGTTTCAACTTTACGGATGAAAGGATAATGAACGGAAAGTGGGTTAATGAGCCTTATGCAGATGTTATCCAGAAATTTTTTCGCTTATTGGCAATCTGTCATACTGCCATACCAGAAGTACATGAAGATACAGGAAATGTCTCATATGAGGCTGAATCTCCAGATGAAGCAGCATTTGTGATTGCAGCGAGAGAAATTGGTTTTGAATTCTTCAAAAGGACTCAGACTAGTTTAACAATGTATGAGTTGGATCCAGTTTCTGGCAAAAAAGTTGAAAGGATGTACAAGCTTCTCAATGTTTTAGAATTCAATAGCTCAAGGAAGCGAATGTCAGTGATAGTGAAAGATGAAGAAGGGAGAATTTTGCTACTTTGTAAAGGTGCTGACAGTGTAATGTTTGAAAGGCTTGGCAAGAATGGGAAGGAGTTCGAAGAGAACACAATGGAGCACGTGCACAAGTATGCTGATGCAGGTCTGAGGACCTTGATATTGGCATATCGTGAGCTCGATAAAGAAGAGTACAAGGAGTTTCATAATAAAATTTCTGAATCAAAAAAATCAGTTAGTGCTGATCAGCAAAACCTAATTGAGGAACTGTCAGATAAGATTGAGAGGGACCTGATTCTTCTTGGTGCAACTGCTGTCGAGGACAAGCTTCAAAATGGGGTTCCTAATTGCATTGACAAGCTTGCCCAAGCTGGAATTAAGATATGGATTTTGACTGGGGATAAAATGGAGACTGCCATCAATGTTGGGTACGCTTGTAGTTTGCTTAGACAAGGAATGAAGCAGATTATAATTCATTTGGAGACTCCTGAAATTCAAGCAGTGGAGAAGCTCCGAGACAAGAGTGCTATTGGCAAGGCTTCAAGGGAAAGTGTTCACAATCAGATATCTGAAGGCACAAAGCAGGTTACTGCCTCCAGAAGAACCTCTGACCAAGCATTTGCTCTGATTATTGATGGAAAATCACTTGCTTATGCTCTAGACGATGATATGAAGAACATGTTTCTAGACCTTGCTGTTTGTTGTGCATCTGTTATCTGCTGCCGCACGTCGCCGAAGCAGAAGGCACTGGTCACTAGACTGGTCAAATATGGAACTCGGAAAACTACTTTAGCTATTGGTGATGGAGCAAATGACGTGGGAATGCTTCAAGAAGCAGATATAGGGGTTGGAATTAGTGGTGTTGAAGGAATGCAGGCCGTTATGTCTAGTGATATTGCAATTGCACAGTTCCGTTATTTGGAACGATTGCTTCTTGTACATGGACATTGGTGTTACCGAAGGATTTCATCAATGATATGCTATTTTTTCTACAAGAATGTCACATTTGGCTTTACCGTATTCTTATATGAGGTGTCTGCATCGTTCTCTGGACAGCCTGCATACAATGACTGGTTTTTGTCTCTCTATAATGTCTTCTTTTCATCACTTCCCGTGATTGCCCTTGGGGTTTTCGACCAGGATGTGTCTGCCCGGTACTGTCTGAAGTTTCCTATGTTATATCAAGAAGGTGTCCAAAATATCCTCTTTAGCTGGCAACGAATTCTCACTTGGATGCTTAATGGGTTTATCAGTGCCATAATAATTTTCTTCTTCTGCACAAAAGCAATGGATATTCAAGCCTTTGATGATAAGGGAAGAACGGCAGGAAGGGAAATACTTGGAGCAACAATGTATACTTGTGTGGTTTGGGTTGTAAACTTGCAGATGGGACTTGCTATAAGTTACTTCACCTTGATTCAACATATTTTCCTCTGGGGCTCCATTGCTCTCTGGTATCTTTTCCTCATCGTGTACGGAACAATGACACCGAGTTTTTCTACAACTGCTTACAAAGTCTTCATTGAAAGTCTCGCTCCGTCTCCTTCCTATTGGATTGTGATATTTTGTGTGGTTATCTCAACACTCACACCATACTTCTCTTTCTCAGCAATTCAGATGCAGTTCTTTCCCACATATCACGAAATGGTACAATGGATAAGGTATGAGAGGAAAACAGATGATCCTGAATCATGTGAAATATTGCGGAAGAGATCATTGCAACCAACCAATGTTGGTTCAACCGCGTGCATAACAGCCAAGAGAGAAAGTGCTACTAACCATAGATAA 3594 0.4023 MKDDGKVTKQLNLSKIYSFACGKQSFKGEHRQIGGPGYSRVVLCNELDNFEVWLRDYADNAVRSTKYTIATFLPKSLFEQFRRVANFYFLVTGILSFTELAPYTAGSAILPLIVVIGATMIKEGIEDWRRKKQDIEVNNRRVKVHKGDGTFEYTEWKNLRVGHIVKIEKDEFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLEVTCSLHEDFKFRDFKATIKCEDPNPNLYSFIGSIEFEEKQYPLSLQQLLLRDSKLRNTDYVFGAVVFTGHDTKVIQNSTDPPSKRSKVERKMDRVIYFLFCILFLMAFVGSIFFCIITKDDLDNDVMKRWYLRPDDSTIFFDPRRAPAAALYHCLTALMLYGFFIPVSLYVSIEFVKVLQSIFINQDIHMYYEEADKAAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVETAMNRRNGSPAIDENVNLSKSGDIRESPDSRASVKGFNFTDERIMNGKWVNEPYADVIQKFFRLLAICHTAIPEVHEDTGNVSYEAESPDEAAFVIAAREIGFEFFKRTQTSLTMYELDPVSGKKVERMYKLLNVLEFNSSRKRMSVIVKDEEGRILLLCKGADSVMFERLGKNGKEFEENTMEHVHKYADAGLRTLILAYRELDKEEYKEFHNKISESKKSVSADQQNLIEELSDKIERDLILLGATAVEDKLQNGVPNCIDKLAQAGIKIWILTGDKMETAINVGYACSLLRQGMKQIIIHLETPEIQAVEKLRDKSAIGKASRESVHNQISEGTKQVTASRRTSDQAFALIIDGKSLAYALDDDMKNMFLDLAVCCASVICCRTSPKQKALVTRLVKYGTRKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNVTFGFTVFLYEVSASFSGQPAYNDWFLSLYNVFFSSLPVIALGVFDQDVSARYCLKFPMLYQEGVQNILFSWQRILTWMLNGFISAIIIFFFCTKAMDIQAFDDKGRTAGREILGATMYTCVVWVVNLQMGLAISYFTLIQHIFLWGSIALWYLFLIVYGTMTPSFSTTAYKVFIESLAPSPSYWIVIFCVVISTLTPYFSFSAIQMQFFPTYHEMVQWIRYERKTDDPESCEILRKRSLQPTNVGSTACITAKRESATNHR 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0721 1197 Pfam Phospholipid-translocating P-type ATPase C-terminal 896 1147 IPR032630 -
Lal6g0721 1197 Gene3D - 543 703 IPR023299 GO:0000166
Lal6g0721 1197 ProSitePatterns E1-E2 ATPases phosphorylation site. 428 434 IPR018303 -
Lal6g0721 1197 SUPERFAMILY HAD-like 421 923 IPR036412 -
Lal6g0721 1197 CDD P-type_ATPase_APLT_Dnf-like 59 1017 - -
Lal6g0721 1197 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1153 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Lal6g0721 1197 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 7 1193 - -
Lal6g0721 1197 Gene3D - 118 288 - -
Lal6g0721 1197 Gene3D - 704 908 IPR023214 -
Lal6g0721 1197 Pfam Phospholipid-translocating ATPase N-terminal 55 104 IPR032631 -
Lal6g0721 1197 SUPERFAMILY Calcium ATPase, transmembrane domain M 52 1146 IPR023298 -
Lal6g0721 1197 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 502 705 IPR023299 GO:0000166
Lal6g0721 1197 SFLD Haloacid Dehalogenase 408 919 - -
Lal6g0721 1197 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 7 1193 - -
Lal6g0721 1197 Pfam Cation transport ATPase (P-type) 536 630 - -
Lal6g0721 1197 SFLD p-type atpase 408 919 IPR044492 -
Lal6g0721 1197 SUPERFAMILY Calcium ATPase, transduction domain A 142 285 IPR008250 -
Lal6g0721 1197 PRINTS P-type cation-transporting ATPase superfamily signature 426 440 - -
Lal6g0721 1197 PRINTS P-type cation-transporting ATPase superfamily signature 868 887 - -
Lal6g0721 1197 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 835 947 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0721 Lal-Chr6 4812276 4819490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0721 11 1192 Primary Pumps ATPases AT1G68710 72.195 0.0 1857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0721 6 4812276 4819490 Lal6g0721 6 4812276 4819490 ECH
Lal22g0644 22 4577324 4585432 Lal6g0721 6 4812276 4819490 LSH