Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0720 ATGTACAACACATATTTCAGCTCAACAATATATGCTGTTAGGTGTAAAGGTTCATTTACTCTATCTTCCAATGGCTACACAAATTTTTGGTATGAAAGATTTGACATAACCCAATCACATTGTTCATCATGTTGTGGTTGTTGTGATTGCTGCTCATTCTCCACTTACAAAGTGCCCGTAACGTCCAGTCTTACGAATGGACTGAGGCAATCTACTCTCCTTCAACTGCCAGCTTCTAGAAGGTTGATTTTGGGTGGTGGAGACCTATACTATTCCCGGCTACCATCTTTTGATCTCCACAGGGGCTGTTCTGAGCTTAACTGTTCTGTTAATGAGATAACTGTTTGCAATAGAAGTACAAGGAGAACAAAGGGAAGATGTTTGTCTGCGGCTCCACGGAATGGAAGGGAAATTTGCCACACAAATGATTCTGATGATGTAGAATCAGTTCTCAGCTTATTGAGTGAAGAAACAGATAAGGATTCTAGCAGTATCAAATCGAAGAATGTGTCTTCACCCAAAATAATGGAAGCAGAGAAGAAAAGAAAAAATGTGATCAAAGAGAGAAATTTGAGTTTAAGTAAGAAAGTAGAAGCAGAGAAGAAAGGAATTTTGAAGCAACATGAGACATCCATTATAGGCTTGAGAAGAGAGAATGAAAAACCCTACAAAGAAAGGGAAACCTTCAATAACAGTGAGAACCATAGGAAGCGAAGAGATGTTTCTAGTTGCTCATCTTTTTACTCGCTTTCATCAGGAGATATTGCAAGTGACCTGGAAGTTCAATATAAGCATGATTTGGAAGAATTATCAGTAGTACATGAGAAAGATTATGCAAATCACGAGGAACAAGTAAAGGGTGAACTCAACAGGCAAAGAAATTACTCACAGAAGCTGCATGGTGTTTCAAATCAGGAAAGGACTGCATTTGGTGCTAATAATATTGATTGGAATCTAAGGAAGAAGTCTGAAAAGAAGCCGACTGACGTGACTATGCAAGAAGCATTATCCACAAAAGAACACAAAGATAAGCATTCAAGAGCATTTAGAACTCATGAATCTAGTTATGGAAACACATCTATTTTACGCAAGCAAGTCGAATGTGAGGAAGATAATTTATCTTTTGTCAAGGATTTGGATAAGAAAATGGAAAAGGAATATATTAAAGCAGGGGAGATAAGAAAGCACCAATCTACAGATACACAAGAGTCTGGTTATAATGAAATTGAAACAACTTTGGCTTCAAAGAAGACATTCAGTAGCAGGGAAGGGAACCTTGAGATATCAGAAGCATTGTTACGTGAAGGAAGTGATGAACATAAAAAGTATGTTGGATCTACTTCTACCACAGGAAAGGAAACTTCAAAATCAAAGAAGACATTCAGTGGCAGGGAAGAGAACCCTGAGATATCAGAAACACTTTTACACGAAACACACGAGGAACGTAAAAAAATTGTTGGTTCTACTTCTACCATTGGAAAGAATGTAATAAATAGGAATTCCCAGAAATATATGGGAAAAACAAAAGTTGAAGACACTGAAAGGACCTTAAATACTCTAATGAATAAATTGAGAGAGGAAAATTTTTCAATTTTGAGTTCTGTTCAGGGAGTAGAGGAGCAACAACGCCAAAAAGGAGAAAAGATCGTTACACAGGCTAAAGAGAGAAGAAAGTCACAGCGATTTTCTGAAGTATCACTAGTTCATGAGAGTAATGTAGAAGATGCATCCATTGTGAAGTCCAGAACTAGAATAAATGACTGGGAAGGGAATTCAGACTCAAGCTCAGATGCAAGGGGTACATGGCGCCAAACAGATAAAAGGACAAATCGGAATATTCAACATGGGAAAGGGTTTGAACATGTCAGCACCTTATCAGAAGGGCATGCCAGTGATGAAAAGCAAGTTTTCAGTTCTCAAAGAATTTCTGGGAAGGTGAGGTTCATCCCAAAAAGTAAATCAATGTCAGTTGTTAAAACTAGAGAGAGCTATTGCCAAACTGATGAAAGGATTACAAATTTTGACTTGCACAGTAAGGGCCAAAGACCAATGAACCTATCAGTTTCTGATGAAACTGTCTCAAGAGAGGAAGCCAGCTTCCACAGATCATTGAATTTGGTTTCCGAGGCTGGAAAACGTGTTATATTGGCAGCAGGTGATGAACGGAGTTCAGAAGGAATCCTGACCCCTTCCTCATCCAGATTGATGGGTCGAAGCTCAGCACATGTTGAACTCAACGCTGAAATTGCAAATCCTGGGATCATCATTGAAAGTTCAGATAGTGGCTCGTCTGCTCCGTATGACAACACAGGAAGAAGTCCCATTTTCCTTTCTGGATCATACTCTACAGATGGAATTCATCAGGCCTACAGCGAACCTTCTAACATCATAGCTCTGGAAGGTGGTACCCTTGGTTCAGCTGAACGTTTAGAGAAATCATCCAAACTGTTTGTTGATGAGTTTGTTGAGAGGGTCAGGCATGAAGTCACCACTTCAGAAACACAAGAGCTAGATGTTACTGGAAAAAGGTTGGCCATTGAAGATGAAGGAAATCAGATCTTCATTTCAAGGCAAGAAGACACTCAAAATGAGTCACAGTTGAAGGAGCGTGGTTCTAGCCATTCCTCTGGGATTCCTGGGACAAAAGGACCTTCTGATGAAATGTGGGATGTAAACGAACCATCTGTTGAGCAAAGTCTTGTAGCTGAAGAACCAGAGATCGGCAAGGAAACTGAGAAAACAATCCTCAGTAGAACTGGGAGGTCCACGTGGAGTATGATTGCAGATGTTGTTCGATCACGTTGGGGCTCACGTACTGGTTCCTTCACTTCAGCTGGAAGATCAGGTGAGAGAAACTCACCAAACAAGTCTGATAGTGAGACATGGTTTTCGGGGCAGGAGCATGAGGAAGCTAGTAAAAGTAATGTAATAAAGGAAACAAGTGTACAACCACAAACCATGACTTCATCAAAACCAAGTACATCTTATACCCAAAGTGAGGGAGAGGGGTCTGACACTAAAAAATTGAAGGACAAAGGAAAAAATCTTGAAGTTAGATCATCTTCTCCGAATACATTGGAAAGTGGATCAACATCATTAGGTGCCTCATATGCTTCTGGTGAGGAACATGCTAACTGGAGTGAAGATGGAAAAGATTTGAAAGTCAGTACTTCAGACATAAAAAGTGTGGAATTCCCAATTCTGTTGCCTGCCAGAGGGCCTCCTTTTGTTGGGAAAATTGTAAATGTTGGCGGGTCTGACATGTCTGGAAGTGAGCCAATTGTGCCAATCAAGAAACCTGTTGCTTCAGTGCAATTTGAATCGTCTGGCTTAGGGGAAAAGGATGAAGAGTTGAAGCAAAAGAAGTTTCAACGGAACACTCAAGTTTTGAGAGATAGGTTTGATGACTGGGAAGAAGCCTACAATGTTGAATTTGAGCAGCGGAGAATAGATGAAATGTTCATGAAGGAGGCACTTTTGGAAGCTAAGAAAGCTGCTGATACTTGGGAGGTCCCTGTTGGTGCAGTTCTTGTGCAGAATGGAAAAGTTATCGCACGGGGATGCAACCTAGTAGAAGAATTACGGGACTCCACTGCTCATGCAGAGATGATTTGTATCCGAGAAGCTTCAGGCCTTCTTCGAACATGGAGACTATCAGACACTACACTATATGTCACACTTGAACCTTGTCCTATGTGTGCTGGAGCCATTCTTCAAGCAAGAATAGACACTGTTGTGTGGGGAGCTCCCAATAAGCTTCTTGGAGCTGATGGTAGCTGGATTAGGCTTTTCCCTGATGGAGGAGAAAGTGCATCTGAACCAAGAGATATGCCACCTGCCCCAGTTCATCCATTCCATCCAAAGATAAAGATAAGAAGAGGAGTCTTGGCCTCGGAATGCGCAGACGCAATGCAGCAATTCTTTCAGCTGAGAAGGAAAAAGAAGAAAGAAGAATCATCAAATGACCAATCTTCCCTTCCTATTACTCACCACCACCCCTCCAAGTTTCTTAACAAGATTCATGACATCTTTCATGTGAAATCAAACAGCAGAAACAAGAAACAATAA 4068 0.4076 MYNTYFSSTIYAVRCKGSFTLSSNGYTNFWYERFDITQSHCSSCCGCCDCCSFSTYKVPVTSSLTNGLRQSTLLQLPASRRLILGGGDLYYSRLPSFDLHRGCSELNCSVNEITVCNRSTRRTKGRCLSAAPRNGREICHTNDSDDVESVLSLLSEETDKDSSSIKSKNVSSPKIMEAEKKRKNVIKERNLSLSKKVEAEKKGILKQHETSIIGLRRENEKPYKERETFNNSENHRKRRDVSSCSSFYSLSSGDIASDLEVQYKHDLEELSVVHEKDYANHEEQVKGELNRQRNYSQKLHGVSNQERTAFGANNIDWNLRKKSEKKPTDVTMQEALSTKEHKDKHSRAFRTHESSYGNTSILRKQVECEEDNLSFVKDLDKKMEKEYIKAGEIRKHQSTDTQESGYNEIETTLASKKTFSSREGNLEISEALLREGSDEHKKYVGSTSTTGKETSKSKKTFSGREENPEISETLLHETHEERKKIVGSTSTIGKNVINRNSQKYMGKTKVEDTERTLNTLMNKLREENFSILSSVQGVEEQQRQKGEKIVTQAKERRKSQRFSEVSLVHESNVEDASIVKSRTRINDWEGNSDSSSDARGTWRQTDKRTNRNIQHGKGFEHVSTLSEGHASDEKQVFSSQRISGKVRFIPKSKSMSVVKTRESYCQTDERITNFDLHSKGQRPMNLSVSDETVSREEASFHRSLNLVSEAGKRVILAAGDERSSEGILTPSSSRLMGRSSAHVELNAEIANPGIIIESSDSGSSAPYDNTGRSPIFLSGSYSTDGIHQAYSEPSNIIALEGGTLGSAERLEKSSKLFVDEFVERVRHEVTTSETQELDVTGKRLAIEDEGNQIFISRQEDTQNESQLKERGSSHSSGIPGTKGPSDEMWDVNEPSVEQSLVAEEPEIGKETEKTILSRTGRSTWSMIADVVRSRWGSRTGSFTSAGRSGERNSPNKSDSETWFSGQEHEEASKSNVIKETSVQPQTMTSSKPSTSYTQSEGEGSDTKKLKDKGKNLEVRSSSPNTLESGSTSLGASYASGEEHANWSEDGKDLKVSTSDIKSVEFPILLPARGPPFVGKIVNVGGSDMSGSEPIVPIKKPVASVQFESSGLGEKDEELKQKKFQRNTQVLRDRFDDWEEAYNVEFEQRRIDEMFMKEALLEAKKAADTWEVPVGAVLVQNGKVIARGCNLVEELRDSTAHAEMICIREASGLLRTWRLSDTTLYVTLEPCPMCAGAILQARIDTVVWGAPNKLLGADGSWIRLFPDGGESASEPRDMPPAPVHPFHPKIKIRRGVLASECADAMQQFFQLRRKKKKEESSNDQSSLPITHHHPSKFLNKIHDIFHVKSNSRNKKQ 1355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0720 1355 MobiDBLite consensus disorder prediction 457 487 - -
Lal6g0720 1355 Pfam MafB19-like deaminase 1152 1251 IPR028883 GO:0002100|GO:0008251
Lal6g0720 1355 Hamap tRNA-specific adenosine deaminase [tadA]. 1155 1312 IPR028883 GO:0002100|GO:0008251
Lal6g0720 1355 MobiDBLite consensus disorder prediction 854 891 - -
Lal6g0720 1355 MobiDBLite consensus disorder prediction 937 1051 - -
Lal6g0720 1355 MobiDBLite consensus disorder prediction 1311 1334 - -
Lal6g0720 1355 PANTHER TRNA(ADENINE(34)) DEAMINASE, CHLOROPLASTIC 898 1340 - -
Lal6g0720 1355 MobiDBLite consensus disorder prediction 1003 1017 - -
Lal6g0720 1355 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 898 1340 - -
Lal6g0720 1355 MobiDBLite consensus disorder prediction 586 610 - -
Lal6g0720 1355 MobiDBLite consensus disorder prediction 1018 1038 - -
Lal6g0720 1355 MobiDBLite consensus disorder prediction 438 487 - -
Lal6g0720 1355 CDD nucleoside_deaminase 1155 1262 - -
Lal6g0720 1355 Gene3D Cytidine Deaminase, domain 2 1139 1326 - -
Lal6g0720 1355 MobiDBLite consensus disorder prediction 976 1002 - -
Lal6g0720 1355 MobiDBLite consensus disorder prediction 937 961 - -
Lal6g0720 1355 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 1149 1271 IPR002125 -
Lal6g0720 1355 SUPERFAMILY Cytidine deaminase-like 1146 1316 IPR016193 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0720 Lal-Chr6 4769831 4777351 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0720 6 4769831 4777351 Lal6g0720 6 4769831 4777351 ECH
Lal22g0643 22 4554323 4560742 Lal6g0720 6 4769831 4777351 LSH