Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0716 ATGGCGTCAGATACAACTTCTAGATCGAATTCCGCTGCTGATTCTTACATTGGTAGCTTGATAAGCTTGACATCAAAAAGCGAGATCAGATACGAAGGTGTTCTCTACAATATCAACACCGAAGAATCCAGTATTGGACTTAGAAACGTGCGATCTTTTGGAACAGAAGGAAGGAAAAAGGACGGTCAGCAAATTCCTCCAGGTGACAAGGTTTATGAGTATATACTGTTTCGCGGATCTGACATTAAGGATTTACAGGTAAAATCTTCACCACCTGTTCAGCCTACTCCACAAGTCAACAATGACCCAGCTATTATCCAGTCTCAATATGTTCGCCCAGTCACCACTTCTACCAGTTTGCCTAACATTGCGAGTGGGTCTTTGGCTGATCTTAGCTCTCATGCCACACAACTTGGACTCCCTGGCTCAAACTTTCAAGGGCCCTTGCCTTTGTATCAACCTGGAGGGAACATAGGGCCATGGGGAGCTTCTCCACCTGCCTCAAATGCAAATGGTGATGGGCTAGCTATGCCAATGTATTGGCAAGGATATTATGGTACCCCAAATGGGCTCCCTAATTTTCACCAACAATCTTTGCTTCGACCACCTCCTGGTTTATTGATGCCTCCATCTATGCAGCATCCGATGCAGTACCCGAATTTTAGTCTCTCCTTATCAACTGGCTCTTCAAATTTGCCTGAATTGCCACCATCATTACTACAAGTCAGTAATGGTGACTCTAGTGTAACATCTACTTCTTTACCACCATCAAATTTGTATCTGGCACCTTCTTCTTTTCCAGAAGCCCCTTCTGCTTTGCCTGTGGCCCCTTCTGTATTGCCTCCTGCACTTTCTGCTTTGCCCCCAGCACCTTCTACTTTACCTCCTGCACCTTCTGCATCACTAGCTTTTGAAACTTTCCCGCTGTCATTGACAGATAAGGCACCAAACGTTTCACTTCCATCAGTCACACCAGCTGCTAACTTGCCATCACTGACTCCTTTGACCAATTCTGGTTCAGAAATGAATGCTATAGCGCCACCAATCTCCAGCAAACCTAATGCAATTTCAGGTTCAAGCTTGGCATATCAAACTGTATCTCAGTTGTCCCCTTCAGTTGTGGGATCATCAAATTCTATCAGTACAGAAACACCAGTCCTTTCTCTGGTAACCCCGGGTCAATTATTGCAGCCAGGTTCAACTGTAGTTTCTTCAGTTCATCATTCACAAACACCTCATAAGGACGTTGAAGTTGTCCAGGTTTTAACAACATCATCTCCTCAGCCATCTCGTTCAGTTTCTGCTGAGAATCAACCACCAATATTGCCATTGCCAGTAACATCACACTCCAGTCACAGGCCTGGTGGAGCTCCTATCCAAAACCATCGTGGCTATGGCTACAGGGGACGTGGAAGAGGGAGAGGAACTGGGGTTTTGCGCCCGGCCACCAAATTCACTGAAGATTTTGATTTCATGGCAATGAATGAGAAGTTCAAGAAGGATGAAGTGTGGGATGATCTTGGTAAAAGCAATAAGTCTCATTTAAAAGAGAAAGATGGGGAAGAAAATTCTTTTGATGAAGATTACAGTCTAGATGAGGACAATGATGATTCATCAAATTTTAAGCCTGTTTATAACAAGGATGATTTCTTTGACTCACTCTCTTCCAATGCGCTTGATCGGGCTTCCCAGAATGGGAGGATAAGATATTCTGAACAAATCAAGATTGATACTGAGACATTTGGTGATTTTGCGAGGCGCCGTGGTGGTAGAGGGGGTCGTGGTCCTTTCCGCGGTGGACACCCTTCTAGAGGTGGTTATTATGGAAGGGGCTATGGCTATTCTGGAAGAGGAAGGGGACGCGACATGCCCAGTCGCAGTTCTTAG 1887 0.451 MASDTTSRSNSAADSYIGSLISLTSKSEIRYEGVLYNINTEESSIGLRNVRSFGTEGRKKDGQQIPPGDKVYEYILFRGSDIKDLQVKSSPPVQPTPQVNNDPAIIQSQYVRPVTTSTSLPNIASGSLADLSSHATQLGLPGSNFQGPLPLYQPGGNIGPWGASPPASNANGDGLAMPMYWQGYYGTPNGLPNFHQQSLLRPPPGLLMPPSMQHPMQYPNFSLSLSTGSSNLPELPPSLLQVSNGDSSVTSTSLPPSNLYLAPSSFPEAPSALPVAPSVLPPALSALPPAPSTLPPAPSASLAFETFPLSLTDKAPNVSLPSVTPAANLPSLTPLTNSGSEMNAIAPPISSKPNAISGSSLAYQTVSQLSPSVVGSSNSISTETPVLSLVTPGQLLQPGSTVVSSVHHSQTPHKDVEVVQVLTTSSPQPSRSVSAENQPPILPLPVTSHSSHRPGGAPIQNHRGYGYRGRGRGRGTGVLRPATKFTEDFDFMAMNEKFKKDEVWDDLGKSNKSHLKEKDGEENSFDEDYSLDEDNDDSSNFKPVYNKDDFFDSLSSNALDRASQNGRIRYSEQIKIDTETFGDFARRRGGRGGRGPFRGGHPSRGGYYGRGYGYSGRGRGRDMPSRSS 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0716 628 CDD LSm14_N 13 87 IPR025609 -
Lal6g0716 628 PANTHER PROTEIN DECAPPING 5-LIKE 5 621 - -
Lal6g0716 628 PANTHER SCD6 PROTEIN-RELATED 5 621 - -
Lal6g0716 628 MobiDBLite consensus disorder prediction 581 628 - -
Lal6g0716 628 MobiDBLite consensus disorder prediction 423 479 - -
Lal6g0716 628 ProSiteProfiles TFG box profile. 565 585 IPR025768 -
Lal6g0716 628 ProSiteProfiles FFD box profile. 543 558 IPR025761 -
Lal6g0716 628 SMART LSM14_2 10 110 IPR025609 -
Lal6g0716 628 ProSiteProfiles DFDF domain profile. 477 513 IPR025762 -
Lal6g0716 628 SMART FDF_2 483 585 IPR019050 -
Lal6g0716 628 SUPERFAMILY Sm-like ribonucleoproteins 15 92 IPR010920 -
Lal6g0716 628 MobiDBLite consensus disorder prediction 423 445 - -
Lal6g0716 628 Gene3D - 7 92 - -
Lal6g0716 628 Pfam FDF domain 484 582 IPR019050 -
Lal6g0716 628 Pfam Scd6-like Sm domain 16 89 IPR025609 -
Lal6g0716 628 MobiDBLite consensus disorder prediction 511 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0716 Lal-Chr6 4732092 4737346 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0716 6 4732092 4737346 Lal6g0716 6 4732092 4737346 ECH
Lal22g0639 22 4524303 4530105 Lal6g0716 6 4732092 4737346 LSH