Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0714 ATGACGTCACCTCTTTCAATCTCTCTCTGTTTCTTTCTTTTCTTCTTCCATTCATGTAACTCCAAAGAATACTTAAAGCTACCGTTAATGCAGAAAACTCCACCCTCTTCACCAGCTGAGCTTCTCGCCGCCGATACAAATCGCATCTCCGCTCTGCACGCCGGACACGCCGTAAAATCTCCGCTTATATCCGGCGCATTTACCGGCTCCGGCCAGTACTTCGCGGATCTCCGAATTGGCTCACCGCCGCAGCGCCTCTTCCTCATCGCCGACACCGGCAGCGACCTAGTCTGGGTGAAATGCTCCGCCTGCAAAAACTGTTCCTACACCCGACCCGGATCCGTATTCCTAGCCCGACACTCCAGAACCTTCTCTTCCCACCACTGCTACAACTCACAGTGCAAACTAATCCCCCACCCGCAACAAACCCGACCCTGTAACCGTACCCGAATCCACACTCCATGCCGCTATGAATACTCCTACGCTGACGGGTCCATTACAAGTGGGTTCTTCTCAAAAGAAACGACGACGTTTAACACAAGCTCAAGCAGGGAAGTGAAAATTAAAAAATTATCATTCGGGTGCGGGTTTCGGATCTCGGGTCCAAGCGTAACGGGTTCTAGTTTTAACGGTGCAGAAGGTGTAATGGGTTTGGGTCGTGGATCCATTTCGTTTAGTTCCCAATTGGGTAAAAGGTTTGGGAACAAGTTCTCTTACTGTTTACTCGACTACACTATATCACCGCCTCCGAAAAGTTACCTCACAATTGGAACTTCCCAAAACGACCGCGTTTCGCGTAAGTTTTTCAGTTACACGCCGTTGCTGGTGAATCCCTTATCTCCTACATTTTACTACATTGCAGTTAACGGCGTTACCGTTGACGGCACGAAATTACAGATTAGTCCTTCTATTTGGGAACTGGACCGACAGGGTAATGGTGGAACCGTCGTGGATTCCGGCACGACGCTTTCGTTTCTGGCGGAGCCGGCGTATAGACAGGTGTTAGGAGCGTTTCAGCGGCGCGTGAGGCTTCCGGCAGCGGTGGATCTTGCTTCAGGGTTTGACTTGTGTGTTAATGTGTCGGGCGTGGCGAGGCCTAAGCTTCCGAAGCTGAGTTTCAGGCTTGCCGGGAATTCAGTGATATCACCGCCGGCGAGGAATTATTTTATAGAGGTTTCGGATCGGGTCTTGTGTTTGGCGATCCAACCCGTGAAATCGGGTTCTGGGTTTTCAGTTATAGGGAATCTGATGCAACAAGGTTACTTGTTTGAATTTGATAGGGACAGATCACAGCTCGGGTTTTCGCGTCATGGATGCGCTTTGCGCTGA 1329 0.5041 MTSPLSISLCFFLFFFHSCNSKEYLKLPLMQKTPPSSPAELLAADTNRISALHAGHAVKSPLISGAFTGSGQYFADLRIGSPPQRLFLIADTGSDLVWVKCSACKNCSYTRPGSVFLARHSRTFSSHHCYNSQCKLIPHPQQTRPCNRTRIHTPCRYEYSYADGSITSGFFSKETTTFNTSSSREVKIKKLSFGCGFRISGPSVTGSSFNGAEGVMGLGRGSISFSSQLGKRFGNKFSYCLLDYTISPPPKSYLTIGTSQNDRVSRKFFSYTPLLVNPLSPTFYYIAVNGVTVDGTKLQISPSIWELDRQGNGGTVVDSGTTLSFLAEPAYRQVLGAFQRRVRLPAAVDLASGFDLCVNVSGVARPKLPKLSFRLAGNSVISPPARNYFIEVSDRVLCLAIQPVKSGSGFSVIGNLMQQGYLFEFDRDRSQLGFSRHGCALR 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0714 442 Gene3D Acid Proteases 258 441 IPR021109 -
Lal6g0714 442 SUPERFAMILY Acid proteases 67 439 IPR021109 -
Lal6g0714 442 Pfam Xylanase inhibitor N-terminal 73 257 IPR032861 -
Lal6g0714 442 Gene3D Acid Proteases 51 257 IPR021109 -
Lal6g0714 442 ProSiteProfiles Peptidase family A1 domain profile. 73 435 IPR033121 -
Lal6g0714 442 CDD pepsin_A_like_plant 72 439 IPR034161 -
Lal6g0714 442 Pfam Xylanase inhibitor C-terminal 284 435 IPR032799 -
Lal6g0714 442 PRINTS Pepsin (A1) aspartic protease family signature 79 99 IPR001461 GO:0004190|GO:0006508
Lal6g0714 442 PRINTS Pepsin (A1) aspartic protease family signature 315 326 IPR001461 GO:0004190|GO:0006508
Lal6g0714 442 PRINTS Pepsin (A1) aspartic protease family signature 411 426 IPR001461 GO:0004190|GO:0006508
Lal6g0714 442 PANTHER BNAA02G27600D PROTEIN 20 441 - -
Lal6g0714 442 PANTHER OS07G0603500 PROTEIN-RELATED 20 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0714 Lal-Chr6 4715713 4717041 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0714 63 439 Miscellaneous Gene Families AT1G77480 24.372 1.87e-22 97.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0714 6 4715713 4717041 Lal6g0714 6 4715713 4717041 ECH
Lal6g0714 6 4715713 4717041 Lal18g1038 18 13362256 13363671 LSH