Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0710 ATGAGCCCATCATGGTTGGTGGACAAAAGTAGAATTGCGACCAAAATAAAGAGTGCTTCAGGTGCATATAATCCTGAGAAAGTTGTATTTAAAAGCAATCCTACCAAGGCTTGCCCAAATTGTCAACATGCTATTGACAACAGCGATGTAGCGCAAGAGTGGCCTGGCTTACCGAAAGGGGTGAAATTTGATCCATCTGATCAAGAGATCATTTGGCACTTGCTTGCAAAAGTTGGTCAAGAAAGTTCAAAACCTCATCCTTTCATTGATGAGTTTATTACCACTATTGAAGGAGTTGATGGAATCTGTTATACCCATCCTAAAAATTTACCTGGTATTAAGCAAGATGGAAGTGTTTCCCACTTCTTCCACCGAGCAATCAAGGCTTATAATACTGGTAGTCGAAAGCGTAGAAAAATACAAGGTCTTGATTCTGGTGATCTCCGCTGGCACAAGACTGGGAAAACTAAAGAAGTCAAATTGAATGGGGTTCAGAAAGGCTATAAAAAGATTATGGTTCTATATTCGAGCAAAGCAGATAAGACTAATTGGGTTACACATCAGTACCACCTAGGAACAGAACAAGATGAAAAGGATGGGGAGTATGTTATCTCTAAAGTTTTTTACCAGCAAGACAAATTGGGTGATAAAGATGATGAGGATATTTCTGAAGCCATCGAAACTACCGAAGCAACAATTTTGAAAGTGGAACCAGTCACTCCCAAACCTGTGACTCTTAACCCTGCCTGTGATGAAACACCATGTTCAGATGTAGGCCTAGTCACTCCCAAATCTGTGACTCCTGACCTTCCTCACAATGAAAGACCGTGTTCAGATGTATACCTGGGACAAGAAACACATCTCCTGCCTCAGATGGAGTATTTGGATGAAATTATAGCTGATTGTGAAGGGCTTGAAAAAACTGATGTGTCCATTGTGGAAAGTGAACATAACGAAGGGATGGATGATAACGAAAGTAATGCTGAGGATGGCCTAAAATGGTGGGACAGTGAGTCACAGAATCTATTGAGTTCACAACAACTCGTCGAAGCATTGTTCATGTGTGATGATCTCCTTCAAAGCCAATCTCCCACTAGAGATGGGGAAAATGGAAAACATAAGGACCAGCCGGGTTTATCAATTTATGCTCATCTAGGACCAGAGTATCTGAAGAAGGATATCGAAGAGTGCCAAAATCTTACCCTTGACCTTGCAAATACCGATGATACACCTTCCGAGTTTCGACTAAGTCAGCTGGAATTCGGTTCACAGGATAGCTTTATCGCCTGGGGTGGCAGCAAGAAAATAAACTGA 1314 0.4155 MSPSWLVDKSRIATKIKSASGAYNPEKVVFKSNPTKACPNCQHAIDNSDVAQEWPGLPKGVKFDPSDQEIIWHLLAKVGQESSKPHPFIDEFITTIEGVDGICYTHPKNLPGIKQDGSVSHFFHRAIKAYNTGSRKRRKIQGLDSGDLRWHKTGKTKEVKLNGVQKGYKKIMVLYSSKADKTNWVTHQYHLGTEQDEKDGEYVISKVFYQQDKLGDKDDEDISEAIETTEATILKVEPVTPKPVTLNPACDETPCSDVGLVTPKSVTPDLPHNERPCSDVYLGQETHLLPQMEYLDEIIADCEGLEKTDVSIVESEHNEGMDDNESNAEDGLKWWDSESQNLLSSQQLVEALFMCDDLLQSQSPTRDGENGKHKDQPGLSIYAHLGPEYLKKDIEECQNLTLDLANTDDTPSEFRLSQLEFGSQDSFIAWGGSKKIN 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0710 437 SUPERFAMILY NAC domain 42 210 IPR036093 GO:0003677|GO:0006355
Lal6g0710 437 Pfam No apical meristem (NAM) protein 58 191 IPR003441 GO:0003677|GO:0006355
Lal6g0710 437 ProSiteProfiles NAC domain profile. 57 210 IPR003441 GO:0003677|GO:0006355
Lal6g0710 437 PANTHER SUPPRESSOR OF GAMMA RESPONSE 1 2 431 - -
Lal6g0710 437 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 2 431 IPR044799 GO:0003700
Lal6g0710 437 Gene3D NAC domain 66 214 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0710 Lal-Chr6 4667979 4672023 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0710 4 210 NAC Transcription Factor Family AT4G28500 52.055 6.42e-70 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal6g0710 NAM 1.3e-19 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0710 6 4667979 4672023 Lal6g0710 6 4667979 4672023 ECH