Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0709 ATGCCACCGATCATCATGTTATTCCTCCTCGCCGTAACTGTCACCGGCGTAGTGAATTCCGTTGACCTTCCAAATTTCAATGAAGCGCCGGCATTCCTCAATGGCAAGGAATGCCCGCGCATCACGGAGAAGAGATACCACAACCCTTCTATCATCCACATCGCGATGACGCTCGACGCCACATACCTCCGTGGTTCCGTTGCCGGGGTCTTATCGGTTCTGCAACACTCATCCTGTCCGGAGAACATCGTCTTCCACTTCATCGCAACTACTCAGCGCCGCCACGAGCTCCGCCGCATCATCACCACCACGTTCCCTTATCTCAATTTTCACCTCTACCACTTCGATTCCAACCTAGTCCGAGGGAAGATATCTTACTCCATTCGGCGTGCACTCGATCAGCCACTTAACTACGCAAGGATCTACCTCGCCGATCTCCTTCCGGCCACCGTCAGACGAATCCTCTACTTCGACTCCGATCTAATTGTCGTCGATGACGTCGCGAAACTCTGGCAAATCGATCTCGGTTCTCACGTTCTCGGCGCTCCGGAATATTGCCACGCTAACTTCACATACTACTTTACGCACCGGTTCTGGTCTAACCCGATCTATGCGGCGTCGTTTAAGGAACGCAACGCGTGCTATTTCAACACTGGAGTAATGGTGATAGATCTATTGAAATGGCGCGAGGGAAGGTACACTGAGAAATTGGAACACTGGATGAAGATCCAGAAGCGGCACAGGATCTACGAGCTTGGATCGTTGCCGCCGTTTCTATTAGTTTTCGCCGGCGACGTTGAAAGAGTAGAACACCGGTGGAATCAGCACGGTCTCGGCGGCGACAATTTGGAAGGTTTATGCCGTGACTTACACCCTGGTCCAGTGAGTTTACTACATTGGAGTGGGAAAGGGAAGCCATGGTTGAGGATCGATTCGAAGAAACCATGTCCGTTAGATAGTCTTTGGGCACCGTATGATCTGTTTCGTCACACGACGTCGTTCTTCTCTGATAGAAGACGAAAGAGGACTCACGAGTGGGGAATGGATAAGGGTGACGTGTTTTTTGGATGGTACGGTGACGTTAAACGTGGATTTGTACAGTATTTTAGTTATGACTTGTGGTTCTTGTTGGTTCTCTTTGAAACGAAGGTGATTTTAGTCATGAAGAAGGCCATTGAATATGGTGCTGTTGAAATTTGGATGATTGAGCGTGTGTACGAAGAGCTTGTGCAAACAGCTGTTCAGAATTTGTTTGTTTTTCTTGAGGTTGAAACACTGATTCTGGGTAAGATCCATAATATGTACAAGGGATTGAAAAGAGAAAATAGAATCATTCAAACAATCATGAGCACCTCTTGTTTGCATTGGATGGTCTTCACTCATCTGGTATTCTGCATAGGGATATTAAGCCACGGAACATTATTTTCTGTGAAGGTAAAGAATCTTGAGGTTGCATAA 1458 0.476 MPPIIMLFLLAVTVTGVVNSVDLPNFNEAPAFLNGKECPRITEKRYHNPSIIHIAMTLDATYLRGSVAGVLSVLQHSSCPENIVFHFIATTQRRHELRRIITTTFPYLNFHLYHFDSNLVRGKISYSIRRALDQPLNYARIYLADLLPATVRRILYFDSDLIVVDDVAKLWQIDLGSHVLGAPEYCHANFTYYFTHRFWSNPIYAASFKERNACYFNTGVMVIDLLKWREGRYTEKLEHWMKIQKRHRIYELGSLPPFLLVFAGDVERVEHRWNQHGLGGDNLEGLCRDLHPGPVSLLHWSGKGKPWLRIDSKKPCPLDSLWAPYDLFRHTTSFFSDRRRKRTHEWGMDKGDVFFGWYGDVKRGFVQYFSYDLWFLLVLFETKVILVMKKAIEYGAVEIWMIERVYEELVQTAVQNLFVFLEVETLILGKIHNMYKGLKRENRIIQTIMSTSCLHWMVFTHLVFCIGILSHGTLFSVKVKNLEVA 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0709 485 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 52 320 IPR029044 -
Lal6g0709 485 Pfam Glycosyl transferase family 8 53 310 IPR002495 GO:0016757
Lal6g0709 485 SUPERFAMILY Nucleotide-diphospho-sugar transferases 52 331 IPR029044 -
Lal6g0709 485 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 7 336 - -
Lal6g0709 485 PANTHER GALACTURONOSYLTRANSFERASE-LIKE 3-RELATED 7 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0709 Lal-Chr6 4648192 4653837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0709 12 331 Glycosyltransferase AT1G13250 77.778 1.65e-180 507
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0709 6 4648192 4653837 Lal6g0709 6 4648192 4653837 ECH