Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0703 ATGCAAACTCAATCTTTCTACATATCCTCCTCTCATGGAAGTAGCAGTAATAATAATGCTTTCATTGAAGCTGATGAAGTTTTTGATGATGAAGCTTCCATTTCTCTCTCTCTTGGTCTTCCTGGCCAACACAACAACCCCAAACCTCTCTCCATCTTAAACCAATCTGATAGAACTCTTCATCAACACCAAAACCCTACTACCTCTGATGACCGCAGTGATATAACAGTTGCCCTACACATTGGTCTTCCCTTCACTGCAGAAAACACAAACCCCACTACCATCAAACCTGATCATTTGACTTCAACTCCAATTCAGGGTCAGTATTGGATCCCATCTCCTGCTCAAATCCTCATTGGACCCACCCAGTTTTCTTGCTCAGTCTGTAACAAAATGTTCAACCGTTTCAACAACATGCAGATGCATATGTGGGGACATGGGTCACAATACAGAAAAGGGCCTGAATCATTGAGAGGGATGAAACCAGCTTCTTCAATGCTGAGGCTACCTTGCTATTGTTGTGCTGAGGGTTGCAAGAACAACATAGATCACCCAAGGGCAAGACCATTGAAGGATTTTAGGACACTTCAGACACACTACAAGAGAAAGCATGGTACAAAGCCATTTGGGTGTAGAAAGTGTGGGAAGCCATTTGCAGTGAGAGGGGATTGGAGGACACATGAGAAGAATTGTGGGAAGCTTTGGTTCTGTATTTGTGGTTCAGATTTCAAGCACAAGAGGTCCCTCAAAGACCATGTTCGTGCCTTTGGTGATGGCCATGCTCCTCATACCGTGGACAGTTGTAGTGATCAGAATACGATTGTAGATGAAGATTTGTTATTAGGTGATGATGAAGATGAGGATGAGTTTGATGAAGATGAAGATGATAGCAACAACGAAAATGATTTTCACTTTTAA 918 0.4259 MQTQSFYISSSHGSSSNNNAFIEADEVFDDEASISLSLGLPGQHNNPKPLSILNQSDRTLHQHQNPTTSDDRSDITVALHIGLPFTAENTNPTTIKPDHLTSTPIQGQYWIPSPAQILIGPTQFSCSVCNKMFNRFNNMQMHMWGHGSQYRKGPESLRGMKPASSMLRLPCYCCAEGCKNNIDHPRARPLKDFRTLQTHYKRKHGTKPFGCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVDSCSDQNTIVDEDLLLGDDEDEDEFDEDEDDSNNENDFHF 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0703 305 PANTHER ZINC FINGER PROTEIN WIP6 16 299 - -
Lal6g0703 305 SUPERFAMILY beta-beta-alpha zinc fingers 193 229 IPR036236 -
Lal6g0703 305 Gene3D Classic Zinc Finger 168 256 - -
Lal6g0703 305 SUPERFAMILY beta-beta-alpha zinc fingers 117 146 IPR036236 -
Lal6g0703 305 PANTHER ZINC FINGER PROTEIN WIP2 16 299 IPR043584 GO:0003700|GO:0010468
Lal6g0703 305 MobiDBLite consensus disorder prediction 285 305 - -
Lal6g0703 305 ProSitePatterns Zinc finger C2H2 type domain signature. 126 146 IPR013087 -
Lal6g0703 305 ProSiteProfiles Zinc finger C2H2 type domain profile. 124 151 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0703 Lal-Chr6 4629412 4631223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0703 30 265 C2H2 Transcription Factor Family AT1G13290 72.385 7.11e-120 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lal6g0703 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0703 6 4629412 4631223 Lal6g0703 6 4629412 4631223 ECH
Lal22g0632 22 4450240 4452203 Lal6g0703 6 4629412 4631223 LSH