Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0702 ATGCAATTATTCGCTGACAAAATGCACCCCCAGAATATGGAGTTCCATGACTATATTGAAGCATTGGAGGAAGAACGAAAAAAAATTCAGGTCTTCAACAAAGAACTTCCTTTATCCTTGGAGCTTGTCACGCAAGCTATTGAAGCGTGTAAGCATCAATTATCTGGAACAACAACGGAGTATAATTTGAATGAGAAATCGGAGTGTTCCAATCAGACAGTAACAGAAGAAGGACCTGTTTTTGAGGAGTTCATTCCTATAAAGAGAAGGGTGTCCCCTGATTATGATGATGATGAAGAACAACAACATTCTCATAAGCACAAGATTCCAAAGGATAGCACTAATTCAGATTGGCTCAGATCTGTTCAGTTGTGGAATCCTGATCCCACTTCTACAAAAGAGGATGTGCCTAGAAAAGCATCTGTTGTGGAAGTGAAGAGGAATGGTGGTGGTGCTTTTCAACCATTTCATAGAGAGGAAAGTAATAATGGAAAGGCTAATGATGCATCAAATGATAAAGCACCCTCTTTGATACAAGTACCTGCAACAAGTTCTACAGGACCAGTTACAAGAAAAAATGTTGATGGAAGTAGTAATAAAGAGGAGAAATGCCACAGAAAGCATAGAAGGTCATGGTCACAAGAGTTGCATAAACGCTTCTTGCATGCCCTTCACCAACTTGGAGCTGCCACACCAAAACAGATTAGAGAGCTAATGAATGTTGATGGCCTCACAAATGATGAAGTCAAAAGTCATTTACAGAAATTTCGTTTACACAACAGAAGACCAAACTTAATGATTCACAAAAAGAATGCAAATTCACAAGCATCTCCTTTGTTTCTTGTGAGAAACATTTTTGTTCAACCATCAGAATATGCTACTGCTATAGCTACATCATCAGGGGAATTGACCAAAGTTACTGCACCCACTGGAATTTATACACCTGTGGCTTCACATCCTCCAATTGTAACACACAAACCAGAAGCTTCAATTCAGAAGCTACAGTTTAAACAATTAGAGTTATCTGAACATTCAAATTCAGAAGGAAGGGCTAATAATCATAGTGAAGGGGCTGGTAATTCAAACTCTACTACTTCATCATCCTCTACCCATACCACCACAATTTCACTTGCTTGTTGA 1140 0.3886 MQLFADKMHPQNMEFHDYIEALEEERKKIQVFNKELPLSLELVTQAIEACKHQLSGTTTEYNLNEKSECSNQTVTEEGPVFEEFIPIKRRVSPDYDDDEEQQHSHKHKIPKDSTNSDWLRSVQLWNPDPTSTKEDVPRKASVVEVKRNGGGAFQPFHREESNNGKANDASNDKAPSLIQVPATSSTGPVTRKNVDGSSNKEEKCHRKHRRSWSQELHKRFLHALHQLGAATPKQIRELMNVDGLTNDEVKSHLQKFRLHNRRPNLMIHKKNANSQASPLFLVRNIFVQPSEYATAIATSSGELTKVTAPTGIYTPVASHPPIVTHKPEASIQKLQFKQLELSEHSNSEGRANNHSEGAGNSNSTTSSSSTHTTTISLAC 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0702 379 MobiDBLite consensus disorder prediction 341 379 - -
Lal6g0702 379 Gene3D - 206 261 - -
Lal6g0702 379 MobiDBLite consensus disorder prediction 94 114 - -
Lal6g0702 379 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 376 IPR044787 GO:0003700|GO:0006355
Lal6g0702 379 SUPERFAMILY Homeodomain-like 204 261 IPR009057 -
Lal6g0702 379 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 206 261 IPR017930 -
Lal6g0702 379 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 376 - -
Lal6g0702 379 MobiDBLite consensus disorder prediction 351 379 - -
Lal6g0702 379 MobiDBLite consensus disorder prediction 150 210 - -
Lal6g0702 379 MobiDBLite consensus disorder prediction 94 115 - -
Lal6g0702 379 Pfam Myb-like DNA-binding domain 209 255 IPR001005 -
Lal6g0702 379 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 207 259 IPR006447 GO:0003677
Lal6g0702 379 MobiDBLite consensus disorder prediction 167 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0702 Lal-Chr6 4615508 4617770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0702 4 333 G2-like Transcription Factor Family AT1G68670 43.875 2.82e-70 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal6g0702 Myb_DNA-binding 6.8e-07 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0702 6 4615508 4617770 Lal6g0702 6 4615508 4617770 ECH
Lal22g0631 22 4431705 4434139 Lal6g0702 6 4615508 4617770 LSH