Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0694 ATGTGTCTAACCGGAGAACCTTGTTCGAAGTTGGAAATGAACAAACCAGATCGCAATTTTCTCGTTGATTCATCTTCGACAACTCGCAAAATCACAAGAAGCATTGAAAACAAAATGTCTATGGCTGATGAACCACTATATCCGATTGCCGTTTTTATAAACGAGCTGAAAAATGATGCAATCCAGCTACGTATGAACTCCATTCGCAAGCTATCAACAAATGCACATGCTCTTGGGGAAGAAAGAACCCAGAGGCAACTGATTCCATTTTTGTGTGAGAATAATGATGATGATGACGATGAGGTACTTCTTGCATTGGCAGAAGAGTTGGGAGTATTCATTCCTCATGTTGGGGGAGTGGAGCATGCCCACGTGTTGCTCCCGGCCTTGGAGACACTTTGCACTGTTGAAGAAACCCCTGTGAGAGATAAAGCTGTGGAATCGCTTTGTAAACTTGGATGTCAAATGAGGGAGAGTGATTTGGTAGAGTATTTCATCCCTTTGGTGAAGAGATTGGCAGCAGATGAATGGTTTACTGCCCGAGCCTCTGCATGTGGACTATTTCATATTCCATACCTTAGTGCACCAGAAATGTTAAAGTCAGAGTTGAGGTCAATATACAGTCAGTTGTGTCAAGATGACATACCAATGGTTAGATGGTCTGCTTCGTCAAATATTGGGAAGCTTGCTGCAAAAGTTGAATATGCTCATTTGAAGGCAGACATCATGTCAAATTTTGAGGATCTTACTAAGGATGATCAAGATTCTGTTAGATTGTTGGCTGTTGAGAGTTGTGCTGCTTTTGGCAAGCTGTTGGAGCCACAAGACTGTGTTGCACATATACTTCCGATTATTGTTAACTTCTCTCAGGATAAGTCTTGGCATGTGCGTTACATGGTTGCAAATCAATTGTATGAGCTCTGCGAAGTTGTAGGCCCTGAACTTACCAGAACGGAATTGGTCTCTGCTTATGTGCGGTTGCTTCGAGACAATGAAGCAGAAGTAAGAATAACAGCTGCGGTGAAGTTGACCAAGTTTTGTCAGATCATAAATCCAGATCTTGCAATTCAGCATATTCTTCCTTGTGTGAAGGAATTGTCATTGGACTCCTCACAGCATGTTCGTTCTGCTTTGGCTTCAGTGATAACGGGAATGGCTCCAGTGTTAGGAAAGGGTGCAACAATTGAGCAACTTCTTCCGATTTTCCTTTCCCTTTTGAAGGATGAGTTTCCTGATGTGCGCCTAAATATCATAAGCAAGCTCAATCAAGTTATTGGAATCGATTTGTTATCTCAATCTTTGTTACCAGCCATTGTTGAGCTTGCTGAGGATAGACATTGGAGGGTTCGTCTTGCAATAGTAGAGTATATACCCTTATTGGCAAGCCAATTAGGGGTTGGGTTTTTCGATGACAAGCTTGGTGCTCTTTGCATGCAGTGGTTACAGGACAAGGTTCGTGGGCTTCCCTTCATTGCTAGTTGGAGTGTTCATTCAATCCGTGAGGCAGCTGCTAACAACTTGAAGCGCCTTGCAGAAGAATTTGGTCCTGAATGGGCTATGCAGCACATAGTTCCTCAGGATGACCGTTCTTCATGTTATCTCGCTGCTTGCTCCTCTGAAATCACTTGTTCAAAATTGTTGCCAGTTGTCATTGCTTCATCAAACGACAGATTGTTGATGTCAGATATTTTTCCATTCAAGCACTTCAGGCAATTGATCTGTCATGATGTCTAG 1734 0.4268 MCLTGEPCSKLEMNKPDRNFLVDSSSTTRKITRSIENKMSMADEPLYPIAVFINELKNDAIQLRMNSIRKLSTNAHALGEERTQRQLIPFLCENNDDDDDEVLLALAEELGVFIPHVGGVEHAHVLLPALETLCTVEETPVRDKAVESLCKLGCQMRESDLVEYFIPLVKRLAADEWFTARASACGLFHIPYLSAPEMLKSELRSIYSQLCQDDIPMVRWSASSNIGKLAAKVEYAHLKADIMSNFEDLTKDDQDSVRLLAVESCAAFGKLLEPQDCVAHILPIIVNFSQDKSWHVRYMVANQLYELCEVVGPELTRTELVSAYVRLLRDNEAEVRITAAVKLTKFCQIINPDLAIQHILPCVKELSLDSSQHVRSALASVITGMAPVLGKGATIEQLLPIFLSLLKDEFPDVRLNIISKLNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIVEYIPLLASQLGVGFFDDKLGALCMQWLQDKVRGLPFIASWSVHSIREAAANNLKRLAEEFGPEWAMQHIVPQDDRSSCYLAACSSEITCSKLLPVVIASSNDRLLMSDIFPFKHFRQLICHDV 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0694 577 Pfam HEAT repeat 281 310 IPR000357 GO:0005515
Lal6g0694 577 SUPERFAMILY ARM repeat 46 525 IPR016024 -
Lal6g0694 577 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 39 558 - -
Lal6g0694 577 Gene3D - 40 559 IPR011989 -
Lal6g0694 577 ProSiteProfiles HEAT repeat profile. 281 319 IPR021133 -
Lal6g0694 577 ProSiteProfiles HEAT repeat profile. 359 397 IPR021133 -
Lal6g0694 577 ProSiteProfiles HEAT repeat profile. 434 472 IPR021133 -
Lal6g0694 577 PANTHER PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT A, PUTATIVE-RELATED 39 558 - -
Lal6g0694 577 ProSiteProfiles HEAT repeat profile. 320 358 IPR021133 -
Lal6g0694 577 ProSiteProfiles HEAT repeat profile. 398 424 IPR021133 -
Lal6g0694 577 ProSiteProfiles HEAT repeat profile. 242 280 IPR021133 -
Lal6g0694 577 Pfam HEAT repeats 400 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0694 Lal-Chr6 4566613 4572069 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0694 6 4566613 4572069 Lal6g0694 6 4566613 4572069 ECH
Lal22g0623 22 4373471 4383813 Lal6g0694 6 4566613 4572069 LSH