Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0687 ATGACTTCCCTGACCACAAGTAAGATAGAGTATAAGGTGATAAAGAGTGTGAAGTGTGAAAACAGTGAGAACAAAAGTAAAAGAGAAAGAGACAGAGATAGAAGCAGCCACCATCACAGTGAATACAATACAAAGATTTTGATCACTATTGCTTTTTCTTGCTGTATGCTACTACTCTCACCAGGGAATTCACCTGTTTCTATGCATTTGAGGTTAATAAGGACTAGTTCTGTTGTGGTGGATTCATTTTTTTATCTTTCAATTTTCTCCATGCTGGAAATCTGGAATCAACCACCTAATCAGAGGAAGACTCTACTTAAGAAACTGAAGCACAAAACCAACTCATTTCAAGACACCAAAATGCAGAGAAAGTTGCGCATAATTTGGCATGATCCTGATGCTACTGACTCTTCTTCAGACGAAGGAGGAGATCAAGAAATGCGTCGAAATAATAGGAGAACCGTGCTTGAGGTTGCTCTTCCGTGTTTTCCTCCTAATTTGGTCACTGATGATGCTATCACTGACTGCTCTAGCAACACTGAATTGAGCAAGAAAAGGGTTTTAACTAAAACCCCACCATTGAAGAGGAGAACTGCTGGCAAATACCGCGGAGTTCGAATGAGGAAATGGGGAAAATGGGCAGCTGAAATTCGTGATCCTTTCAAAGGTGCGCGACTGTGGTTGGGAACATACAACACTGCAGAGGAAGCTTCACAAGCTTATGAGAGGAAAAAGCTTGAATTTGAGACTATGGCTGAAGCTATGTATGGTGACAAGAGCAGCAATAACAATGCTGATGTTTTTGGTGTTTCTGCTGAAGCTATGACTGCTCAAGATAAGAGCAGCTTCAACTATAGTGTTTCTTCTGGTGCAGCTTCTGTATCAGACTCAAGGTCTGCTGCTACTTTGGATGACTCAGAGTGTGTGTTGTCTCATTTGTCGCCTTTGTCCGTGCTCGAATTGGACACATCAACCTCCAAGGCCTCCAATTCAGTGGAGAACGTTAAGGTCTCGAGCAATGAATTTGTCGAGAAGAGGTGTTTAGAGACTGAGTTTGCTGAGATGGCCAGTAAAGTTGATGCTGATAGTGAGATGAATGATTTGGAGGCTGAACTGGCAGACCTTGAAATGCCAGATTTGAGTATTTTGAATGCACTACTACCACCATCTACTGATGCTCCATCTGCATTTGAGTTTGACTGGTTATCATTCGACGGTTGTGATGATGATCTTGGTGGCCTGGAGGACATTCACATTGGTGGAATTGGCGAGGATGGGCCTAGTGCGCTTCCGGATTTCGATTTTGGCGACTTAAGTGCCGATGAGTTTGCTGGTTGGATTGAAGAAGCCCTGAATATACCTTGCATATAA 1371 0.4274 MTSLTTSKIEYKVIKSVKCENSENKSKRERDRDRSSHHHSEYNTKILITIAFSCCMLLLSPGNSPVSMHLRLIRTSSVVVDSFFYLSIFSMLEIWNQPPNQRKTLLKKLKHKTNSFQDTKMQRKLRIIWHDPDATDSSSDEGGDQEMRRNNRRTVLEVALPCFPPNLVTDDAITDCSSNTELSKKRVLTKTPPLKRRTAGKYRGVRMRKWGKWAAEIRDPFKGARLWLGTYNTAEEASQAYERKKLEFETMAEAMYGDKSSNNNADVFGVSAEAMTAQDKSSFNYSVSSGAASVSDSRSAATLDDSECVLSHLSPLSVLELDTSTSKASNSVENVKVSSNEFVEKRCLETEFAEMASKVDADSEMNDLEAELADLEMPDLSILNALLPPSTDAPSAFEFDWLSFDGCDDDLGGLEDIHIGGIGEDGPSALPDFDFGDLSADEFAGWIEEALNIPCI 456
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0687 456 SUPERFAMILY DNA-binding domain 201 248 IPR016177 GO:0003677
Lal6g0687 456 PRINTS Ethylene responsive element binding protein signature 202 213 IPR001471 GO:0003700|GO:0006355
Lal6g0687 456 PRINTS Ethylene responsive element binding protein signature 224 240 IPR001471 GO:0003700|GO:0006355
Lal6g0687 456 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF119 104 455 - -
Lal6g0687 456 Gene3D AP2/ERF domain 200 256 IPR036955 GO:0003700|GO:0006355
Lal6g0687 456 Pfam AP2 domain 201 250 IPR001471 GO:0003700|GO:0006355
Lal6g0687 456 ProSiteProfiles AP2/ERF domain profile. 201 264 IPR001471 GO:0003700|GO:0006355
Lal6g0687 456 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 104 455 - -
Lal6g0687 456 CDD AP2 201 248 IPR001471 GO:0003700|GO:0006355
Lal6g0687 456 SMART rav1_2 201 265 IPR001471 GO:0003700|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lal6g0687 Lal-Chr6 4503120 4505085 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0687 117 455 AP2-EREBP Transcription Factor Family AT1G68550 32.768 2.37e-33 126
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Lal6g0687 AP2 1.7e-10 CL0081
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0687 6 4503120 4505085 Lal6g0687 6 4503120 4505085 ECH