Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0674 ATGAGTAACAATGGCCAAAGTTCTGGTGCTAATCACTACATCACGGGTTTAATATGCAACGCTGGTGCTGGTGCTGCAGCTGGAGCCATAGCGGCTACATTTGTGTGCCCATTGGATGTGATCAAGACAAGGTTACAAGTTCATGGCCTTCCTCCTGCACAGAAAGATATTAGTATTGAGGTTTATATTCAAGATCTATCTGAGATCGAGACCTCTTGTAAAAGGGGTGTTATAAAACACCCAATGACCAACAAGACATGGTCTAGTAGTGTAAGGCCCCACTGGATCCCAAATAGACCAAAAGGTCAAAGTTTCCATTCCCGTGAGCGACCGTGGTTGAGAGGGACAATCACGCAAAGGGAAGGGTGGTCGGAACCACTGTGTGGGTCTTATAGTAGCCTAACTTTTGCTGTTGTCCTAGGTAGCATCATCATCACGAGCTTGCAGAATATATTTAAGACTGAAGGTTTCAGGGGAATGTACCGTGGCCTTTCACCAACAATACTGGCATTACTTCCAAATTGGGCAAAAAATAAGAAGAGGCATAATCCCAAAAGCTTAGATAACCTTCCTATCAACTTCGATTTGTCATATAACCTTCTCTTGGGTACAGCCTTCCCCAACCTACTTGTTGAGAATATTGTCACTATCGCTACTTTGGAAATTCCTTGTCAACTCACCACCCCCTTACTTTATGTACTTAAACTTATAATGGAATCTAGCTTTGCCACTGTGGTGCCATGTGACAAGTATGCCACAGGTCCGAGTCACGGAATTAGCCTCTTGAAAATGCAAGATGGTTCCAATGAACTAACAACAGTTGGAAATATTATATCCGCTGCTGGTGCTGGGGCAGCAACAGCAATTTCGACAAATCCATTGTGGGTTGTTAAGACAAGACTCCAAACTCAAGGAATGAGGCCTGATGTTATACCTTACAAAAGCATTCTTTCTGCTTTGACAAGGATCACACATGAGGAAGGCATGCGAGGGCTTTACAGTGGCATTGTACCTTCACTGGCTGGAATAAGTCATGTTGCGATCCAATTTCCAGCATATGAGAAGATCAATGGTCCTCATGGAAGCAATATCTTCTCTTGCGAAGTGGTTCTTGTAATAATAAGTGGATTTTTCTCTGTTTTCTTTGATGCCGCCAATCAAACTAAAAATTCAAATGCTTTAGACAACACAACTGTTGACAAGCTGAGTCCTGGGAATGTTGCGATTGCATCATCTATCTCAAAAGTAATTGCATCTGTAATGACTTATCCACACGAGGTTATACGCTCCAGGCTGCAAGAGCAAGGCCATGCCAAAAATAATGGCGCCCAGTATGCCGGGGTTATTGATTGTACTAGGAAGGTGTTCCAAAAGGAAGGCATTCCAGGATTTTATCGTGGTTGCGCAACGAATCTGTTACGAACAACTCCATCTGCTGTTATTACATTCACTAGTTATGAGATGATACACAGGTTTTTGCAGCAGATTATATCTCAGGACAAGAAGGGGTATGCACAAGGTTGTCAATAG 1530 0.4294 MSNNGQSSGANHYITGLICNAGAGAAAGAIAATFVCPLDVIKTRLQVHGLPPAQKDISIEVYIQDLSEIETSCKRGVIKHPMTNKTWSSSVRPHWIPNRPKGQSFHSRERPWLRGTITQREGWSEPLCGSYSSLTFAVVLGSIIITSLQNIFKTEGFRGMYRGLSPTILALLPNWAKNKKRHNPKSLDNLPINFDLSYNLLLGTAFPNLLVENIVTIATLEIPCQLTTPLLYVLKLIMESSFATVVPCDKYATGPSHGISLLKMQDGSNELTTVGNIISAAGAGAATAISTNPLWVVKTRLQTQGMRPDVIPYKSILSALTRITHEEGMRGLYSGIVPSLAGISHVAIQFPAYEKINGPHGSNIFSCEVVLVIISGFFSVFFDAANQTKNSNALDNTTVDKLSPGNVAIASSISKVIASVMTYPHEVIRSRLQEQGHAKNNGAQYAGVIDCTRKVFQKEGIPGFYRGCATNLLRTTPSAVITFTSYEMIHRFLQQIISQDKKGYAQGCQ 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0674 509 Pfam Mitochondrial carrier protein 271 356 IPR018108 -
Lal6g0674 509 Pfam Mitochondrial carrier protein 20 54 IPR018108 -
Lal6g0674 509 Pfam Mitochondrial carrier protein 144 176 IPR018108 -
Lal6g0674 509 Pfam Mitochondrial carrier protein 402 494 IPR018108 -
Lal6g0674 509 Gene3D Mitochondrial carrier domain 3 194 IPR023395 -
Lal6g0674 509 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 13 68 IPR044712 GO:0006862|GO:0055085
Lal6g0674 509 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 133 177 IPR044712 GO:0006862|GO:0055085
Lal6g0674 509 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 394 502 IPR044712 GO:0006862|GO:0055085
Lal6g0674 509 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 259 357 IPR044712 GO:0006862|GO:0055085
Lal6g0674 509 ProSiteProfiles Solute carrier (Solcar) repeat profile. 271 359 IPR018108 -
Lal6g0674 509 SUPERFAMILY Mitochondrial carrier 266 488 IPR023395 -
Lal6g0674 509 Gene3D Mitochondrial carrier domain 248 497 IPR023395 -
Lal6g0674 509 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 394 502 - -
Lal6g0674 509 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 259 357 - -
Lal6g0674 509 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 133 177 - -
Lal6g0674 509 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 13 68 - -
Lal6g0674 509 SUPERFAMILY Mitochondrial carrier 19 176 IPR023395 -
Lal6g0674 509 ProSiteProfiles Solute carrier (Solcar) repeat profile. 402 492 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0674 Lal-Chr6 4414987 4419796 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0674 264 497 Chloroplast and Mitochondria Gene Families AT1G25380 60.684 8.05e-90 278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0674 6 4414987 4419796 Lal6g0674 6 4414987 4419796 ECH
Lal22g0594 22 4187165 4192363 Lal6g0674 6 4414987 4419796 LSH