Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0166 ATGATGATGTTTGAAGACATGGGGTTTTGTGCCGATTTCGATATGTTATGTGGTGGTTCCCTTGGGGAAGGGGATATGGCTGTAAAGCAAACAGAACGAGATGCAGCGGTTGAGGATGATTACAGTGATGAAGAACTTGATGTGGATGAGCTTGAGAAAAGGATGTGGAGGGACAAGATGCGCCTTAAGCGATTGAAGGAACAAAGTAAGCCTAAGGAAGGGATTGATGCAGCAAAACAAAGGCAATCCCAAGAACAGGCAAGGAGGAAAAAGATGTCAAGAGCTCAAGATGGAATATTGAAGTACATGCTGAAGATGATGGAGGTTTGCAAGGCGCAAGGATTTGTTTATGGGATAATTCCGGAGAAGGGAAAACCAGTGACTGGGGCATCTGACAATCTTCGTGAATGGTGGAAGGATAAGGTTAGGTTTGACCGGAATGGTCCAGCTGCCATAGCCAAGTATCAAGTAGATAATGCAATCCCAGGGAAGAATGATGGATGCAACTCTATTGGTCCTACTCCAAACACCTTGCAAGAGTTGCAGGACACGACGTTGGGTTCTCTCTTATCAGCGCTCATGCAGCACTGTGATCCCCCTCAGAGGCGGTTCCCATTAGAGAAGGGTGTCCCTCCACCATGGTGGCCCACAGGGAATGAAGAATGGTGGCCACAGATTGGCTTACCTAAAGATCAATGCCCTCCTCCTTACAAGAAACCTCATGACCTCAAGAAGGCATGGAAGGTTGGTGTTCTGACTGCAGTTATCAAGCATATGTCTCCTGATATTACCAAGATTCGCAAGCTTGTGAGGCAGTCAAAATGCCTTCAAGATAAAATGACAGCCAAGGAAAGTGTAACCTGGCTTGCCATCATCAATCAAGAGGAAGCCCTGGCTCGTGAACTATATCCTGATTATTGCCCCCCATTATCATCAAGTGGAGGTAGTGGATCTTTGGCCCTCAATGATTGCAGTGAGTATGATGTTGATGGGGCGGAAGAAGAGCCAAACTTTGATGTGGAGGACCGAAAACCTGAGAATCTTCATCCATCCAATCTCTTGATGGATAGAATGAGTGGAAGGCTGCCCATGCCAATGCAGCCACTTCAGAGACCTTCTCTTCCAATCAAGGGAGAGGTACTCACAAACATAGATTTTATGCGAAAGAGGAAGGTTTCTAGTGACTTCAACATGGTGGATCAGAAGATTTATACATGTGAACATCCTCAGTGTCCTTACAGTGAAATTCGCCTGGGTTTTCAAGACAGGTCTTCTAGGGACAACCATCAGTTGAATTGTCCTTATAGAAGCAATTCTTCAGATTATTGTGCTCCAAATTTTCATGTTAATGATGTTAAACCGGTTATATTCCCTCAGTCCTATGTTCAGCCCAATACTACAGCTCAGCCTGCTAATTCGGTTCCACCTTCATTCGATCTAACTGGACTTGGAGTTCCAGAGGAAGGCCAGAAAATGATCAGTGATCTTATGTCAATCTATGATACAAATGTTCTTGGAAACAAGAATGGAAGTTCCTCCAATGGTGGTGTAGTTGCAGAAAATCAAAAGTTTGCTATTCCTCAGCCCCGCATTCAGCAACAACAGGACAATTTCTTTACTGGTCAAGGAATGGTGATGATGGATGGAAACTTCTTTACAAGAGAGGAAAGTAACTTTGACCGGTTCAAGGCTATGAACTCTCCTTTTGAGACCAACCACAACAACAACAACAGCAACAATTTCCAATTTATGTTTGGTCCATCTTGTGATTTGGCATCCTTTGATTTTAAGGAGGATATTCCAGGAGTAGGGATGGATCCACTTCAGAAACAGCCAAATGTTTCAACATGGTACCAGTGA 1860 0.4425 MMMFEDMGFCADFDMLCGGSLGEGDMAVKQTERDAAVEDDYSDEELDVDELEKRMWRDKMRLKRLKEQSKPKEGIDAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQVDNAIPGKNDGCNSIGPTPNTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGNEEWWPQIGLPKDQCPPPYKKPHDLKKAWKVGVLTAVIKHMSPDITKIRKLVRQSKCLQDKMTAKESVTWLAIINQEEALARELYPDYCPPLSSSGGSGSLALNDCSEYDVDGAEEEPNFDVEDRKPENLHPSNLLMDRMSGRLPMPMQPLQRPSLPIKGEVLTNIDFMRKRKVSSDFNMVDQKIYTCEHPQCPYSEIRLGFQDRSSRDNHQLNCPYRSNSSDYCAPNFHVNDVKPVIFPQSYVQPNTTAQPANSVPPSFDLTGLGVPEEGQKMISDLMSIYDTNVLGNKNGSSSNGGVVAENQKFAIPQPRIQQQQDNFFTGQGMVMMDGNFFTREESNFDRFKAMNSPFETNHNNNNSNNFQFMFGPSCDLASFDFKEDIPGVGMDPLQKQPNVSTWYQ 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0166 619 MobiDBLite consensus disorder prediction 63 92 - -
Lal6g0166 619 Gene3D - 81 158 IPR023278 GO:0003700|GO:0005634
Lal6g0166 619 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 1 618 - -
Lal6g0166 619 Pfam Ethylene insensitive 3 49 296 IPR006957 GO:0005634
Lal6g0166 619 Gene3D - 173 306 IPR023278 GO:0003700|GO:0005634
Lal6g0166 619 Coils Coil 48 68 - -
Lal6g0166 619 SUPERFAMILY DNA-binding domain of EIN3-like 176 299 IPR023278 GO:0003700|GO:0005634
Lal6g0166 619 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 1 618 IPR006957 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0166 Lal-Chr6 1167456 1169315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0166 2 618 EIL Transcription Factor Family AT3G20770 60.182 0.0 726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Lal6g0166 EIN3 7.6e-129 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0166 6 1167456 1169315 Lal6g0166 6 1167456 1169315 ECH
Lal22g0162 22 1008911 1010758 Lal6g0166 6 1167456 1169315 LSH