Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1129 ATGGGTTTATCTTCTCTGCATGTGTGCATGGATTCATCAGATCATTGGTTGCAGGGAACAATTCACGAGGAGTCTGGAATGGATTCTTCTTCACCATCAGGGGACATGCTTACATGCTCAAGGCCCATGATAGAGAGGAGGCTAAGGCCCCCACATGACCAAGCTCTAAATTGCCCAAGGTGTGACTCAACCCACACCAAGTTCTGTTACTACAACAACTATAGCCTCTCTCAGCCAAGGTACTTCTGCAAGACTTGTAGAAGGTACTGGACCAAAGGTGGCACTCTTAGGAACATCCCTGTTGGTGGTGGTTGTAGAAAGAACAAGAAAGTCTCTACAAAGAAGTTCAATGACCAATTAGCTAATAATAATCATCAAAACCAACCACAACCTCAAGGATCTAATTCCTATCACCACCACAACCCTAAAGATCTTCAACTTTCTTTCCCTGATATGCAATTTTCACAGCTGAGTAGTTTTCTTGGGACTAATGCTGCTGGAACACTAGGAAACCCTGATTTCATGGAGAACAGGTATAATAATATTAATGGTATGCTCGATAACCCTATTAGGCCTATTGATTTCATTGAGAGCAAAGTGGAGAGCATAATTGGGAGTAGCAGTAGTTCTAGGAATTATGATTTTTTTGGAAACTGTGATCATATGGGTATGGCTGTTGGGCTAAGAGGAGAGTATCATATGAATGGCCAAAATGGGTTGCCATTGCCACCAAATATTCATTCTCTATACTCTCCTGCATCATTTGGTGCCATGTCTCTTGATGGTGGTGGTAACAATAATAATAGGGGTTATATAATGGATCACTCTTGCCACCGTTTGATGCTTCCATATGATCATGTTACTAATGAGGGCCATAATGATTCAATTGATGTGAAGCCAAACCCTAAGCAGCTACTATCCCTTGAATGGCAAGACCAGGGTTGTTCTGATGCTGGGAAAGACTCATTTGGGTATCTTAACGGTCCAGGATCATGGAATGGTATGATGAACGGCTATGGATCTTCCACATCAAACCCTTTGGTCTAG 1047 0.4231 MGLSSLHVCMDSSDHWLQGTIHEESGMDSSSPSGDMLTCSRPMIERRLRPPHDQALNCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSTKKFNDQLANNNHQNQPQPQGSNSYHHHNPKDLQLSFPDMQFSQLSSFLGTNAAGTLGNPDFMENRYNNINGMLDNPIRPIDFIESKVESIIGSSSSSRNYDFFGNCDHMGMAVGLRGEYHMNGQNGLPLPPNIHSLYSPASFGAMSLDGGGNNNNRGYIMDHSCHRLMLPYDHVTNEGHNDSIDVKPNPKQLLSLEWQDQGCSDAGKDSFGYLNGPGSWNGMMNGYGSSTSNPLV 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1129 348 MobiDBLite consensus disorder prediction 120 142 - -
Lal4g1129 348 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 12 342 IPR045174 GO:0003700|GO:0006355
Lal4g1129 348 Pfam Dof domain, zinc finger 53 110 IPR003851 GO:0003677|GO:0006355
Lal4g1129 348 ProSitePatterns Zinc finger Dof-type signature. 58 94 IPR003851 GO:0003677|GO:0006355
Lal4g1129 348 ProSiteProfiles Zinc finger Dof-type profile. 56 110 IPR003851 GO:0003677|GO:0006355
Lal4g1129 348 PANTHER - 12 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1129 Lal-Chr4 14702982 14705378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1129 1 348 C2C2-Dof Transcription Factor Family AT5G62940 40.534 6.89e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lal4g1129 zf-Dof 2.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1129 - - gmx:778107 476.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1518 14 16002580 16004399 Lal4g1129 4 14702982 14705378 PCT
Lal19g1079 19 14501402 14503366 Lal4g1129 4 14702982 14705378 PCT
Lal4g1129 4 14702982 14705378 Lal14g1518 14 16002580 16004399 PCT
Lal4g1129 4 14702982 14705378 Lal19g1079 19 14501402 14503366 PCT