Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0433 ATGCAGTTGTATCATCATCCGTTCGATTTGGACAGTCAGAAAGTGAGACTAGCTTTGGAAGAGAAAGGCATCGATTATACATCGTACCATGTCAACCCAATAACTGGCAAGAACTTGGATTCCTCGTTCTTCAAGATGACTCCGAGTGGAAGACTCCCGGTTTTTCAAAACGGCTCTCACATTATTTACAACACTATTGATATAATTAAGTATATTGAAAGAATTGCCGAGGTCTCCTCAGGGTCTCAGACTATCAGTTCAAGTGGTAGGGATGTGATTGAATGGATGCATAAGATACAAGAGTGGGATCCAAAGTATTTTTCACTTTCCCATACTCCAGAGAAACACCGTGCTTATGTTTCCAAGTTTAAAAGGCGGGTGGTGATTGCTCGAATGGCCGACTCTTCTGAATTAGCAGGTGCTTACCATGAGAAGTTAAGAGAAGCCTATCAGACTGAAGAAAAATTGAAAGACGCAGATGTTTTGAGAAGAAGCAAGGAGCATTTGATTAGACTGCTTGATGAAACGGAGAGGCAGCTGAGTGAAACACGTTATTTAGGAGGTGAACAATTTAGCATGGCTGATGTGATGTTCATTCCGATTTTGGCTCGTTTAGTGCTCCTGGGTTTAGAGAGCGAGTATATAGCCGCTAGGCCGAACATTTCTGAGTACTGGTTTACGGTTCAGAAGAGGGCTAGTTATAAAAAGGTGATTGGCAAGCATTTTGATGGTTGGAGAAAGCACAAAACATTATTGAAAACATGGTGCTTTGTTCATATTAGAAGTTTGCTCAAGAGGTACTAG 804 0.4142 MQLYHHPFDLDSQKVRLALEEKGIDYTSYHVNPITGKNLDSSFFKMTPSGRLPVFQNGSHIIYNTIDIIKYIERIAEVSSGSQTISSSGRDVIEWMHKIQEWDPKYFSLSHTPEKHRAYVSKFKRRVVIARMADSSELAGAYHEKLREAYQTEEKLKDADVLRRSKEHLIRLLDETERQLSETRYLGGEQFSMADVMFIPILARLVLLGLESEYIAARPNISEYWFTVQKRASYKKVIGKHFDGWRKHKTLLKTWCFVHIRSLLKRY 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0433 267 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
Lal4g0433 267 CDD GST_N_family 1 73 - -
Lal4g0433 267 CDD GST_C_family 129 225 - -
Lal4g0433 267 Pfam Glutathione S-transferase, N-terminal domain 3 77 IPR004045 -
Lal4g0433 267 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 267 IPR044617 GO:0004364
Lal4g0433 267 Pfam Glutathione S-transferase, C-terminal domain 161 224 - -
Lal4g0433 267 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Lal4g0433 267 SUPERFAMILY GST C-terminal domain-like 151 240 IPR036282 -
Lal4g0433 267 Gene3D - 133 238 - -
Lal4g0433 267 Coils Coil 159 179 - -
Lal4g0433 267 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 113 251 IPR010987 -
Lal4g0433 267 Gene3D Glutaredoxin 1 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0433 Lal-Chr4 3033665 3036178 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0433 1 267 Glutathione S-transferase Gene Family AT1G77290 66.667 4.02e-136 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0433 K22077 - gmx:100792543 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0433 4 3033665 3036178 Lal4g0433 4 3033665 3036178 ECH
Lal17g0501 17 3476981 3481465 Lal4g0433 4 3033665 3036178 LSH