Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0137 ATGGAGACACGCGCCGCCAAGAGAAAAGCTACCTCTGTCAACATACATGACGTTCAAGATGAAAACTCCATGAAGAAACAACGCGTTGTGTTAGCTGAAATTTCAAATGTACCCAATTTCACTGAGGAACCCATATGTGTGAAGAATGCGATGATTAAGAAGGTTGTAGCTTCAAGGAAGCCACTTTCTTCTCTTGAATCAGATTTCGATGATGAGAATAAGGCATGTGGTAATGCCACTGCGAAATCAACCACCAATGTCAAATTCAGTGACCCACAGAATTGTGAACAAATTGTTAATGATATATGTTCATATCTTTGCAGAATGGAGCGAGAGAATAAGCGGAGGCCAATGTTGAATTACATTGAGAGAGTTCAGAGTGAAGTTACCCCTCATATGAGAGGGATCTTGGTGGATTGGTTAGTTGAGGTTACAGAAGAGTATAAGCTTCTCCCAGACACACTTTTTCTCTCAATCTCGTACATTGATAGGTTTCTGTCTCTTAACCGTGTCTCTAAACCCGAGTTTCAGTTGTTGGGTGTTTCCGCAATGCTGATTGCAGCTAAGTATGAAGAAATAAGCCCACTTCATGTGGAAGATTGTGTGTTGATTACTGATAACAATTATCATAAGTCAGAGGTTGTGAAAATGGAAGCTGATATACTCAAATCCCTATTTTTTGAAATGGGCAATCCTACTGCTAAGACTTTTCTAAGGAGGTTTGCTGGCATTGGTTGTGAGAATAATAAAGCTAAAAAATTGCAGTTTGAGTGTTTATGTAACTATCTTGCCGAGCTAAGTTTGTTGGACTATGGTTGTTTGAAGTTTTTGCCTTCTTTGGTGGCTGCATCTGCTACATTTCTTGCCAGATATATCATGTGGCCTAAATTGCATCCTTGGACTTCAAACCTATGTAAATCCACTGGGTATAATGTAGCTGAGTTGAAGGAATGTGTTCTCATTTTACACGACTTGTATATGGCAAGAAGGGGAAGATCTTTCACAGCCATTAGAGAGAAATATAAGCAGCACAAGTTCAAAAATGTGGCACACTTGCCTTCTCCTCCACAGTTGCCAAGTTCTCTCTTTGAAGAAGAGTAA 1101 0.3978 METRAAKRKATSVNIHDVQDENSMKKQRVVLAEISNVPNFTEEPICVKNAMIKKVVASRKPLSSLESDFDDENKACGNATAKSTTNVKFSDPQNCEQIVNDICSYLCRMERENKRRPMLNYIERVQSEVTPHMRGILVDWLVEVTEEYKLLPDTLFLSISYIDRFLSLNRVSKPEFQLLGVSAMLIAAKYEEISPLHVEDCVLITDNNYHKSEVVKMEADILKSLFFEMGNPTAKTFLRRFAGIGCENNKAKKLQFECLCNYLAELSLLDYGCLKFLPSLVAASATFLARYIMWPKLHPWTSNLCKSTGYNVAELKECVLILHDLYMARRGRSFTAIREKYKQHKFKNVAHLPSPPQLPSSLFEEE 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0137 366 PIRSF Cyclin_A_B_D_E 1 365 IPR039361 -
Lal4g0137 366 SMART cyclin_7 139 223 IPR013763 -
Lal4g0137 366 SMART cyclin_7 236 324 IPR013763 -
Lal4g0137 366 PANTHER CYCLINS 20 365 IPR039361 -
Lal4g0137 366 ProSitePatterns Cyclins signature. 134 165 IPR006671 -
Lal4g0137 366 Pfam Cyclin, N-terminal domain 101 229 IPR006671 -
Lal4g0137 366 SUPERFAMILY Cyclin-like 232 357 IPR036915 -
Lal4g0137 366 Gene3D - 115 230 - -
Lal4g0137 366 SMART Cyclin_C_2 232 355 IPR004367 -
Lal4g0137 366 CDD CYCLIN 133 222 IPR013763 -
Lal4g0137 366 Gene3D - 101 351 - -
Lal4g0137 366 CDD CYCLIN 232 323 IPR013763 -
Lal4g0137 366 Pfam Cyclin, C-terminal domain 232 354 IPR004367 -
Lal4g0137 366 PANTHER CYCLIN-A3-1-RELATED 20 365 - -
Lal4g0137 366 SUPERFAMILY Cyclin-like 90 229 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0137 Lal-Chr4 857780 860296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0137 1 365 Core Cell Cycle Gene Families AT1G47230 51.366 1.21e-125 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0137 K06627 - gmx:100787417 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0137 4 857780 860296 Lal4g0137 4 857780 860296 ECH