Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0080 ATGTCTTGTTCCCCTATTATTCTCTCCTTTCTCCTCCTCCACTTCTTCCTCGCCACCACGTCGGAAGCCGCCGGTGGCAATGGAGAATGGAATGTTATACAGAAGAGCATCGGCATTGTAGCCATGCACATGCAGCTACTACACAACGATCGTGTTGTAATTTTCGACCGAACCGATTTCGGCTTATCAAACTTAAGACTACCAGGTGGAAAATGTCGTAAGGACCCAACAGAGCTAGTTGTTAAAACAGACTGCACCGCTCACTCCATCGAATACAACGTTGCAGTCAACACATTCAGACCGTTATTTGTTCAAACAAATGTGTGGTGTTCATCCGGTTCAGTAACACCAGATGGAACACTGGTTCAAACCGGTGGGTTCAACGATGGAGACCGAGCCGTTAGAATCTTCAAACCATGCCCTACGTGTGACTGGCAAGAAATTAATGTTGGCCTTTTAGGTCGAAGATGGTATGCAACCAATCAAGTGTTGCCGGATGGAAAACAAATCATTATCGGAGGGAGAAGACAATTTAACTACGAGTTTTACCCTAAAAACGACGCCGCATCCAACAACTTACACAATTTACCATTTTTGTCTCAAACCAATGACGCTGCAGAGAATAACCTATACCCCTTCGTTTTTCTAAACGTGGACGGTAACTTATTCATCTTTGCTAATAACCGCGCTATCCTATTTGACTACCGTAATGACAGGATTGTTAGGACCTACCCTACGATCCCGGGTGGGGATCCTAGAAGCTACCCTAGTAGTGGCTCTGCGGTTTTGCTTCCATTGAGGAATCTAGAAGCAAAAAATGTTGAAGCTGAGGTTTTGGTATGTGGTGGTGCTCCCAAAGGGTCTTACGAGAAAACCTTCACGCGTGAATTTATGGGAGCATTGGACACGTGTGCTAGAATTAAAATAACTGAACCGAACCCGAAGTGGGTTATGGAGACTATGCCAAGTGGTAGAGTGATGGGTGATATGGTGACACTACCAAATGGCAATGTTTTGATTATTAACGGAGCAGGTTCGGGTAGTGCTGGATGGGAATCAGGTCGGAACCCAGTTCTGAGCCCGGTTCTTTATAAACCAAATAATGCGGCCGGTTCTCGGTTCGAGCTCCAAAAACCGAGTGGAATTCCAAGAATGTATCACTCCACTGCCGTTTTGCTACGTGATGGTCGTGTACTTGTTGCTGGGAGCAACCCTCATATTGGTTATAACTTCAGCAACGTGTTATTCCCAACGGAATTGAGGTTGGAAACGTTTTCTCCTTCCTATTTGGAACATGGATTCAATAACGTGCGACCCACAATCTTGTTTCCTGCTTCACAATCAAAACTAAAGTATGGTCAAAAGATAAAGGTACGGTTCCAGGTGGCAGCCAAGTTGGATAAAAATGCTTTGTTGGTAACAATTTTAGCACCACCTTTTACCACGCACTCTTTTTCCATGAATCAGAGGTTGTTGGTGTTGGAACCAAATGATTTTAATGTTATTGGGAAAACAACGTATGAAGCTGAAGTCACCGCACCTGGTTCATCTATTCTTGCACCACCAGGTTTTTATTTAGTATTTGTGGTCCACCAAGATATACCGAGCCAGGGTATATGGGTCCAGATAATGTGA 1635 0.444 MSCSPIILSFLLLHFFLATTSEAAGGNGEWNVIQKSIGIVAMHMQLLHNDRVVIFDRTDFGLSNLRLPGGKCRKDPTELVVKTDCTAHSIEYNVAVNTFRPLFVQTNVWCSSGSVTPDGTLVQTGGFNDGDRAVRIFKPCPTCDWQEINVGLLGRRWYATNQVLPDGKQIIIGGRRQFNYEFYPKNDAASNNLHNLPFLSQTNDAAENNLYPFVFLNVDGNLFIFANNRAILFDYRNDRIVRTYPTIPGGDPRSYPSSGSAVLLPLRNLEAKNVEAEVLVCGGAPKGSYEKTFTREFMGALDTCARIKITEPNPKWVMETMPSGRVMGDMVTLPNGNVLIINGAGSGSAGWESGRNPVLSPVLYKPNNAAGSRFELQKPSGIPRMYHSTAVLLRDGRVLVAGSNPHIGYNFSNVLFPTELRLETFSPSYLEHGFNNVRPTILFPASQSKLKYGQKIKVRFQVAAKLDKNALLVTILAPPFTTHSFSMNQRLLVLEPNDFNVIGKTTYEAEVTAPGSSILAPPGFYLVFVVHQDIPSQGIWVQIM 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0080 544 Pfam Galactose oxidase-like, Early set domain 438 543 IPR015202 -
Lal4g0080 544 PANTHER OXIDASE, PUTATIVE, EXPRESSED-RELATED 18 543 - -
Lal4g0080 544 Pfam Glyoxal oxidase N-terminus 42 283 IPR009880 -
Lal4g0080 544 SUPERFAMILY E set domains 434 543 IPR014756 -
Lal4g0080 544 Gene3D Immunoglobulins 437 544 IPR013783 -
Lal4g0080 544 PANTHER SECRETED PROTEIN-RELATED 18 543 - -
Lal4g0080 544 SUPERFAMILY Galactose oxidase, central domain 92 431 IPR011043 -
Lal4g0080 544 Gene3D - 24 435 IPR037293 -
Lal4g0080 544 CDD E_set_GO_C 433 543 IPR015202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0080 Lal-Chr4 473023 474657 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0080 4 473023 474657 Lal4g0080 4 473023 474657 ECH
Lal17g0068 17 400265 401902 Lal4g0080 4 473023 474657 LSH
Lal21g0126 21 856499 858532 Lal4g0080 4 473023 474657 LSH
Lal8g0549 8 3792892 3798082 Lal4g0080 4 473023 474657 PCT