Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1824 ATGGTTTATACTTCCATCCCAGCTTATTCAGCCAACTGGCAGCAACAACAGCAAACAAATCATCAAGTTGGCAACAATGTTGCCAGCTCACATCTTCTTCCACCACCCCCTCCGCCAGTAGCCCAGTCTCATGGAGTCGATGCAGGCACCGGCTCTATCAGGCCGGGCTCGCTGGCAGATAGGGCTAGGATGGCTAACATACCTATGCAAGAAGCACCACAAAAATGTCCAAGATGTGAATCTACCAACACCAAGTTTTGCTACTTCAATAACTACAGCCTCTCTCAGCCCCGCCACTTCTGCAAGACCTGTAGAAGGTACTGGACACGTGGCGGGGCTTTGAGGAGCGTCCCCGTTGGTGGAGGCTGCCGCAGGAACAAGAGGAGCAAAGGAACCAGTAGCAGCAACAACAGCTCCAAATCGTCGCCGGCGAGCTCCGACCGCCAAGCACTCAGTGCTAATTCCAACAACTCAATCTCCTCTTCTGATATGGTAGCTGGCTTTGGACCAGCAATGCCACCACAGCTTCGATACATGTCCCCATTGCATCAACTTGGTGATAATTTTGCAAGTGGTGGAGAAATAAGCTTAAACTATGGCCTTAACTATGGCAACATTTCAAGTCAAATAGGTGGAGTAGGAGTAGGAGACTTGAATTTTCACATTGGAAATGCTTTAGGCCATGGTGGTGGCAGCGGTGGCGGTGGTGGTGGTGGTTCTATTTTATCTGCAGCTGGTTTAGACCAATGGAGGGTTCCACAAACACACCAATTTCCCTTCTTGACTGGTTTGGAAGCTTCATCACATGGGTTGTACCACCAATTTGAAGGTGGTAGTACTAGTCCGGCGACCGGATATGGCGGTGTCCGGCCGAAGGTATCAACTTCTGGTGTGATATCTCAGATGGCTTCAGTAAAAATGGAAGAGAGTGGTCAACAACTTAATTTGTCAAGGGAATTTTTGGGAATGAATAGTTCAGGTAATGAGCAATATTGGAGTACCAATGGTGGTGGAACTACAACACCAGCTTGGACAAATCTTTCTGGCTATAACTCTACCAGTAATCAGCTATAG 1074 0.4832 MVYTSIPAYSANWQQQQQTNHQVGNNVASSHLLPPPPPPVAQSHGVDAGTGSIRPGSLADRARMANIPMQEAPQKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRSKGTSSSNNSSKSSPASSDRQALSANSNNSISSSDMVAGFGPAMPPQLRYMSPLHQLGDNFASGGEISLNYGLNYGNISSQIGGVGVGDLNFHIGNALGHGGGSGGGGGGGSILSAAGLDQWRVPQTHQFPFLTGLEASSHGLYHQFEGGSTSPATGYGGVRPKVSTSGVISQMASVKMEESGQQLNLSREFLGMNSSGNEQYWSTNGGGTTTPAWTNLSGYNSTSNQL 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1824 357 ProSiteProfiles Zinc finger Dof-type profile. 74 128 IPR003851 GO:0003677|GO:0006355
Lal2g1824 357 Pfam Dof domain, zinc finger 73 128 IPR003851 GO:0003677|GO:0006355
Lal2g1824 357 Coils Coil 350 357 - -
Lal2g1824 357 PANTHER DOF ZINC FINGER PROTEIN DOF3.6 6 355 - -
Lal2g1824 357 MobiDBLite consensus disorder prediction 336 357 - -
Lal2g1824 357 MobiDBLite consensus disorder prediction 18 53 - -
Lal2g1824 357 MobiDBLite consensus disorder prediction 127 158 - -
Lal2g1824 357 MobiDBLite consensus disorder prediction 118 158 - -
Lal2g1824 357 ProSitePatterns Zinc finger Dof-type signature. 76 112 IPR003851 GO:0003677|GO:0006355
Lal2g1824 357 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 6 355 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1824 Lal-Chr2 20534713 20536440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1824 38 353 C2C2-Dof Transcription Factor Family AT3G55370 40.299 2.78e-55 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lal2g1824 zf-Dof 2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1824 - - gmx:100796820 386.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1824 2 20534713 20536440 Lal2g1824 2 20534713 20536440 ECH