Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0884 ATGGCGGAGCAGAGGAACGGAACCGTGAACGACGGCGATTCACAAACAGAGGAGAACCATAACAGCAACAAGAATAACAATAACATTGACGACAATAACAAGAACAAGAATTCAGATCCAGACCTATTCTGCTGCTTGTTGCAACCGGCCACCGCCGACGGTGATCCCGAATATATTGGCATCCGACGCCTACTCCTTCACCGGAAGGCCGAGGCCGGCATTATTCGCCGTAGAGATTGGAGATGCAATGGAAGAACTTATGTGGCATACCGAAACTATATTTGTAGGCCTAGAAACTGGGAAAGTTCACACGTCCGAAGCCTTCAAACTACTCCTGGAAACAGTGGTCGATGGATTCCGCCACCAAGTCCCCTCTCTCGTTGGTCTGAGGTGGACAGCTGGAGTTCTAGTAGGGATGTGCAAAGTGGAAATCCAGCATCTAATCACCGGACAAGTTTTGACTCAAGTGCTAGTGGTTCTGATCGTCCACGGCATCGTGGGGTTGAGCCTGCCTATTCTTTTGTAGGAATGCATTGCATCTTTGATCAGTGCAAGGCTTCAGTTACGGTGTTAAAGTTTGGACACATGAGTTCCGATCTACTTGCTTATGGGGCGTCAGATGGAACCTTGACTGTGTGCACTGTTTCTGAGAAACCTTCAGTCATCAAACAATTAAATGGGCATTCCAAAGACGTTACAGATTTTGATTTTTCATCAAACAATCAGTACATTGCTTCATCTTCATTGGATAAAACTGTGAGAGTATGGGAGATAGCAAAAGGCATTTGCATACGGGTGATATATGGAGTTTCTTCACAATTGTGTATTCGTTTTCACCCTGTGAATAACAACTTCCTTTCAGTTGGCAATGCAAACAAAGAAATCAATGTATTCAATTTTAGCACTGGAAGGATAATTAATAAATCTGTATTTGATAGTGAAGTTACCTCTATGGACCATGATCATACAGGACATCTCATTTTTTGTGGGGATGCACAGGGATATATATACTCAGTTAATATGAACTCCCACACAGGTGTGTTATCTCGCTCTCATCGCTATCGAAGTAGCAACAGACACAAATCTCCTGTCACAACAGTGCAGTACCGAAGTTTCTCTCTACTGGCTAGAGGACCTGTGTTGTTGACATGTACTCAGGATGGACATTTGTCGTTCTTCAGGTTCAAAAATAATTTGCCATTAACCCTAATTGCATTCAGTTGTCTTCTGAACTCTCCTCGCTTTTTCTTTGGAGCACTAAAGTTGGTATTTTGTAGTGTGGCTATGGAGATAAAAGGTTATTTAACTCTGCGGTGCTCACTCAAACTAGCTCCGCGTATTCACAAAATTCAAGCCTCTTTTTGCCCTCTTCTTTCTCTTGAAAAAGGAGAATTCATAGTTACTGGAAGTGAGGACTCAAATGTCTATTTCTATGATTTAACAAGGCCGAGACATACATGTGTAAACAAGCTACAGGGTCATCGGTTTCCTGTTACGGCTATTGCTTGGAACCATGGAGAAAACTTTTTGGCTTCATCAGATTTTTATGGCGTAGTAATTGTTTGGAAGAGAGAAAGAACAAATGAAAACAAGAATATATAA 1602 0.4226 MAEQRNGTVNDGDSQTEENHNSNKNNNNIDDNNKNKNSDPDLFCCLLQPATADGDPEYIGIRRLLLHRKAEAGIIRRRDWRCNGRTYVAYRNYICRPRNWESSHVRSLQTTPGNSGRWIPPPSPLSRWSEVDSWSSSRDVQSGNPASNHRTSFDSSASGSDRPRHRGVEPAYSFVGMHCIFDQCKASVTVLKFGHMSSDLLAYGASDGTLTVCTVSEKPSVIKQLNGHSKDVTDFDFSSNNQYIASSSLDKTVRVWEIAKGICIRVIYGVSSQLCIRFHPVNNNFLSVGNANKEINVFNFSTGRIINKSVFDSEVTSMDHDHTGHLIFCGDAQGYIYSVNMNSHTGVLSRSHRYRSSNRHKSPVTTVQYRSFSLLARGPVLLTCTQDGHLSFFRFKNNLPLTLIAFSCLLNSPRFFFGALKLVFCSVAMEIKGYLTLRCSLKLAPRIHKIQASFCPLLSLEKGEFIVTGSEDSNVYFYDLTRPRHTCVNKLQGHRFPVTAIAWNHGENFLASSDFYGVVIVWKRERTNENKNI 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0884 533 ProSiteProfiles Trp-Asp (WD) repeats profile. 491 532 IPR001680 GO:0005515
Lal2g0884 533 MobiDBLite consensus disorder prediction 1 35 - -
Lal2g0884 533 Gene3D - 173 421 IPR015943 GO:0005515
Lal2g0884 533 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 225 258 - -
Lal2g0884 533 MobiDBLite consensus disorder prediction 135 165 - -
Lal2g0884 533 MobiDBLite consensus disorder prediction 135 158 - -
Lal2g0884 533 ProSitePatterns Trp-Asp (WD) repeats signature. 244 258 IPR019775 -
Lal2g0884 533 PANTHER WD REPEAT-CONTAINING PROTEIN 13 25 527 - -
Lal2g0884 533 MobiDBLite consensus disorder prediction 1 33 - -
Lal2g0884 533 Gene3D - 453 532 IPR015943 GO:0005515
Lal2g0884 533 PANTHER WD REPEAT PROTEIN 26-RELATED 25 527 - -
Lal2g0884 533 ProSiteProfiles Trp-Asp (WD) repeats profile. 225 266 IPR001680 GO:0005515
Lal2g0884 533 SUPERFAMILY WD40 repeat-like 179 523 IPR036322 GO:0005515
Lal2g0884 533 SMART WD40_4 484 523 IPR001680 GO:0005515
Lal2g0884 533 SMART WD40_4 350 394 IPR001680 GO:0005515
Lal2g0884 533 SMART WD40_4 174 214 IPR001680 GO:0005515
Lal2g0884 533 SMART WD40_4 302 340 IPR001680 GO:0005515
Lal2g0884 533 SMART WD40_4 218 257 IPR001680 GO:0005515
Lal2g0884 533 SMART WD40_4 260 299 IPR001680 GO:0005515
Lal2g0884 533 SMART WD40_4 443 479 IPR001680 GO:0005515
Lal2g0884 533 Pfam WD domain, G-beta repeat 222 256 IPR001680 GO:0005515
Lal2g0884 533 Pfam WD domain, G-beta repeat 487 523 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0884 Lal-Chr2 5764839 5771492 Transposed