Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0883 ATGCACATCAAGGAAATATGTTTGGAGGGTTTCAAATCATACGCCACCAGAACCGTAGTTCCAGGTTTCGATCCCTTCTTTAACGCCATCACCGGTTTGAACGGTTCCGGAAAATCCAACATTCTTGATTCCATTTGCTTCGTTTTGGGAATCACCAATTTGCAGCAGGTTAGGGCTTCAAATCTTCAGGAGCTTGTGTATAAACAAGGTCAAGCAGGAATAACCAAAGCTACGGTTTCGATTGTGTTTGATAACTCTCATAGGAATCGTAGCCCTCTTGGATATGAAGAACATTCTGAGATTACCGTTACAAGACAGATCGTGGTTGGAGGAAGGAACAAATATTTGATCAATGGGAAACTTGCACAACCAAGCCAAGTTCAAAACCTTTTCCATTCTGTGCAGCTAAATGTGAATAATCCGCATTTTCTTATAATGCAAGGGCGAATCACAAAGGTTTTAAATATGAAACCACCAGAGATATTGTCTATGCTTGAGGAAGCTGCAGGGACAAGAATGTACGAGACAAAGAAAGAGGCTGCTCTAAAAACACTTGAGAAGAAGCAGAGTAAGGTTGATGAGATTAACAAGCTTCTTGACCAGGAGATACTGCCTGCTCTGGAGAAGCTAAGGAAAGAAAGGACACAGTACATGCAATGGGCTAATGGCAATGCCGAGTTAGATAGGCTAAAAAGATTTTGTATAGCTTATGAGTATGTTCAAGCAGAGAGGATTAAAGACAATGCGATATCTGAGGTAGAACAAGTAAAATCTAAGATAGTAGAGATTGATAATACTGCTAAGACAACTCAGGTGGAAGTAAAGGAAATGGAGAACAAAGTAGCTCAGTTGACTGCTGCAAAGGAAGCAAGCATGGGTGAAGAACTGAAACCTTTGTCAGAGAAGGTAGATAAGCTTTCCCAGAATCTTGTGAAAGAAACGTCTATACTAAATAATAAAGAAGACACACTGAGAAGTGAAGAAGCCAACAAAAAGAATATTGCCAAAAATATGGAGGAACTGAAGCAATCTGTAGAAGAGAAGGCCTCTGCTGTTAAAAAGGCTGAAGAGGGAGCAGCTGATCTGAAAAAGAGGGTTGGTGAGCTCACGAAGAGTCTGGAGGAGCATGAAAAGGAATATCAGGGTGTTTTAGCTGGTAAGAGCAGTGGTGATGAGGAGAAATGCTTAGAGGACCAACTAGGTGATGCAAAGGTAGCAGTTGGCAGTGCCGAAACAGAATTGAAACAGCTGAAAACCAAAATTAGCCATTGTGAAAAGGAACTCAAAGAGAAAACAAATCAATTAAGATCAAAACGTGAAGAAGCTATTTCTGTAGAAAATGAGCTAAATGCTAGACAAAAAGATGTGGAAAATGTCAAAAGGGAATTAGAGTCTCTTCCTTATAAAGAGGGTGACATGGAAGCTTTGCAAAAGGAGCGTGCATCTGAGACGGATTGTGTGCAAAAGTGGAAGGATGAGATACGTAATGTTTCAGCATACTTAGCAAATGTTGAATTTACATACCGTGATCCGGTCAAGAACTTTGATAGGTCAAAGGTGAAAGGTGTTGTTGCAAAACTCATTAAAGTAAAGGATCCATCGACAATGACTGCCCTAGAGGTAACAGCTGGTGGAAAGTTGTTTAATGTTGTTGTGGACACAGAAAGTACTGGAAAACAACTACTACAGAATGGTCAGCTTAGAAGAAGAGTGACAATTATACCTTTGAATAAAATACAATCATATGCTGTTCCATCCAGAGCTCAACAAGCTGCTGTTAGATTGGTGGGCAAGGGGAATGCTGAAGTAGCACTTTCTTTGGTTGGTTATGAAGAAGAATTGAGGAACGCAGTGGAATATGTATTTGGTTCAACTTTTGTTTGCAAAACCATTGATGCTGCCAAGGAGGTGGCATTCAACAGGGAGATTCACACCACAAGTGTCACTCTTGAAGGAGATATATTTCAGCCAAGTGGTCTTCTGACTGGTGGAAGCCGAAAGGGAAGTGGTGATCTTTTGAAGCTGCTTCATGATTTGGCTGAGGCTGAGTCAAAACTTTCGGTGCACCAAAGGAGGTTATCAGAGATCGAGGCTAAGATTACAAAGCTCCTTCCTCTTCAAAAGAAATTTAAAGACCTCAAAGCACAGTTAGAACTCAAGTCATATGATCTTTCATTGTTTCAGAGCAGAGCTGAGCAAAATGAGCATCACAAGCTTGGTGAGTTAGTGAAGAAGATTGAGCAAGAGCTTGAAGAAGCAAAATATGCAACCAAGGAAAAGCAACTTTTGTATGAAGATTGTGTCAAGACTGTCAAGTCACTTGAGAAATCAATCAAAGACCATGATAATAATCGAGAGAGGAGGTTAAAAGATTTGGAGAAAATGATAAAGTCCATCAAGTCACAAATGCAGTCATCTTCAAAAGATCTTAAGGGACATGATAATGAAAAGGAGAGGTTTGTAATGGAAATGGAAGCTGATGTCAAGGAGCAACGTTCCTTGGAAAATCAATTAGCTTCATTGGGAACACAGATTACTAATCTTGCTTCAGAAGTAGAGGAACAAAGAGCTAAGGTTGTGGCTGCAAGGAATGAACTCGATCAAGTTCAGTCACAGTTGACTTCAATTCGCCAGAAAATGAAGGACTGTGACAAGGAAATCAGTAATATTATTAAGGAGCAGCAAAAGCTTGAACATAAACTTACTGAGGGTAATCTTGAACGGAAGAGGATGGAAAATGAGGTAAATCGAATGGAGATGGAGCAAAAAGACTGTTCTACAAGAGTTGACAAATTGATAGAGAAGCATGCATGGATTGCTACTGAAAAACAGTTATTTGGTAAAAGTGGGACTGATTATGATTTCTCTTCCAGAAATACTGGTAAAGCAAGGGAGGAACTTGAGAGGCTTCAAGCTGAACAATCTGGGCTTGAGAAAAGGGTCAATAAAAAAGTAATGGCAATGTTTGAAAAGGCAGAAGATGAGTACAATGACTTGATGTCCAAGAAAAACATAATTGAGAATGACAAGTCTAAAATCAAGAAGGTGATGGAAGAGCTAGATGAGAAGAAGAAGGAGACATTAAGTGTTACCTGGATCAAAGTGAACAGCGACTTTGGATCCATCTTTTCTACACTATTACCGGGCACAATGGCAAAGTTAGAACCTCCAGAAGGTTGCAGTTTTCTTGATGGGCTTGAAGTCCGTGTTGCGTTTGGAAGTGTGTGGAAACAGTCTTTGTCTGAACTGAGTGGAGGTCAGCGATCACTGCTCGCACTTTCTCTGATCCTGGCACTTCTTCTATTCAAACCAGCACCACTTTACATCCTTGACGAGGTTGATGCGGCTCTTGATTTGAGTCACACACAGAACATAGGGAGAATGATAAAGGCTCACTTTCCACACTCCCAGTTTATTGTGGTGTCACTGAAGGAAGGCATGTTCAATAATGCAAATGTTCTATTCCGGACAAAATTTGTAGATGGTGTTTCAACTGTTCAGCGAACTGTTGCTAAGCAAAACAAGTGA 3528 0.4036 MHIKEICLEGFKSYATRTVVPGFDPFFNAITGLNGSGKSNILDSICFVLGITNLQQVRASNLQELVYKQGQAGITKATVSIVFDNSHRNRSPLGYEEHSEITVTRQIVVGGRNKYLINGKLAQPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYETKKEAALKTLEKKQSKVDEINKLLDQEILPALEKLRKERTQYMQWANGNAELDRLKRFCIAYEYVQAERIKDNAISEVEQVKSKIVEIDNTAKTTQVEVKEMENKVAQLTAAKEASMGEELKPLSEKVDKLSQNLVKETSILNNKEDTLRSEEANKKNIAKNMEELKQSVEEKASAVKKAEEGAADLKKRVGELTKSLEEHEKEYQGVLAGKSSGDEEKCLEDQLGDAKVAVGSAETELKQLKTKISHCEKELKEKTNQLRSKREEAISVENELNARQKDVENVKRELESLPYKEGDMEALQKERASETDCVQKWKDEIRNVSAYLANVEFTYRDPVKNFDRSKVKGVVAKLIKVKDPSTMTALEVTAGGKLFNVVVDTESTGKQLLQNGQLRRRVTIIPLNKIQSYAVPSRAQQAAVRLVGKGNAEVALSLVGYEEELRNAVEYVFGSTFVCKTIDAAKEVAFNREIHTTSVTLEGDIFQPSGLLTGGSRKGSGDLLKLLHDLAEAESKLSVHQRRLSEIEAKITKLLPLQKKFKDLKAQLELKSYDLSLFQSRAEQNEHHKLGELVKKIEQELEEAKYATKEKQLLYEDCVKTVKSLEKSIKDHDNNRERRLKDLEKMIKSIKSQMQSSSKDLKGHDNEKERFVMEMEADVKEQRSLENQLASLGTQITNLASEVEEQRAKVVAARNELDQVQSQLTSIRQKMKDCDKEISNIIKEQQKLEHKLTEGNLERKRMENEVNRMEMEQKDCSTRVDKLIEKHAWIATEKQLFGKSGTDYDFSSRNTGKAREELERLQAEQSGLEKRVNKKVMAMFEKAEDEYNDLMSKKNIIENDKSKIKKVMEELDEKKKETLSVTWIKVNSDFGSIFSTLLPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKAHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVAKQNK 1175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0883 1175 Coils Coil 789 809 - -
Lal2g0883 1175 Coils Coil 239 294 - -
Lal2g0883 1175 Coils Coil 672 699 - -
Lal2g0883 1175 Coils Coil 831 928 - -
Lal2g0883 1175 Coils Coil 178 198 - -
Lal2g0883 1175 Coils Coil 953 980 - -
Lal2g0883 1175 Coils Coil 982 1026 - -
Lal2g0883 1175 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 2-2 1 1173 - -
Lal2g0883 1175 Gene3D - 591 666 - -
Lal2g0883 1175 SMART SMC_hinge_2 518 638 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Lal2g0883 1175 Coils Coil 473 493 - -
Lal2g0883 1175 Gene3D - 426 590 - -
Lal2g0883 1175 CDD ABC_SMC2_euk 1 156 IPR027120 GO:0005524|GO:0016887
Lal2g0883 1175 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 1152 IPR027417 -
Lal2g0883 1175 Coils Coil 317 379 - -
Lal2g0883 1175 Pfam RecF/RecN/SMC N terminal domain 2 1161 IPR003395 -
Lal2g0883 1175 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 2 1 1173 - -
Lal2g0883 1175 PIRSF SMC 1 1156 IPR024704 GO:0005524|GO:0016887
Lal2g0883 1175 Pfam SMC proteins Flexible Hinge Domain 518 638 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Lal2g0883 1175 Gene3D - 813 903 - -
Lal2g0883 1175 Gene3D - 1 202 IPR027417 -
Lal2g0883 1175 Gene3D - 994 1175 IPR027417 -
Lal2g0883 1175 Coils Coil 407 466 - -
Lal2g0883 1175 SUPERFAMILY Smc hinge domain 479 686 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0883 Lal-Chr2 5753038 5762362 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0711 1 4750992 4760374 Lal2g0883 2 5753038 5762362 LSH