Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0882 ATGGAGGAAGAGAAGAAGAGCAGTGAGATAGTGAAGGTGGAACCAAAACCCAGTAAAGGGTTCAGTTCAAAAGTGATTGATTTGATAGAGAAAGTGGTGGTGAAGTTGTTCTATGATTCTTCATTGCCACATCATTACCTTGCTGGTAATTTTGCACCTGTGACTGATGAGACCCCTCCCACTAAGGATCTTCCTGTTACAGGGTACCTCCCGGATTGCTTGAATGGAGAGTTTGTGAGGGTAGGACCTAATCCAAAGTTTTCTCCTGTGGCTGGATATCACTGGTTTGATGGAGATGGAATGATTCATGGTTTGCGTGTGAAAGATGGAAAAGCTACATATGTTTCCCGTTTTGTCAGAACTTCTCGTCTTAAACAAGAAGAATACTTTGGAGGCTCCAAATTTATGAAGATTGGAGATCTCAAGGGTCTATTTGGACTGTTAATGGTTAACATGCAAATTTTAAGAGCTAAATTTAAAGTGCTGGATGTTTCTTATGGAAATTCAACAGCTAATACAGCTCTTGTTTATCACCATGGGAAGCTTCTAGCACTCTCAGAAGCAGATAAACCCTATGTTATTAAAGTTATTGAAGATGGTGATTTGCAGACACTTGGCTTGCTAGATTATGACAAGAGATTGGGCCATTCCTTCACTGCTCATCCAAAAGTCGACCCATTTACTGGCGAGATGTTTACGTTCGGCTATTCACATACACCACCATATGTCACATACAGAGTAATTTCAAAGGATGGTTATATGCATGATCCTGTACCCATAACAGTATCAGAGCCCATCATGATGCATGATTTTGCCATCACAGAGAATTATGCAATATTCATGGATCTTCCTCTGTATTTTAGACCAAAGGATATGGTGAAGAAGAACACACTAATATTCACATTTGATTCAACCAAGAAAGCTCGTTTTGGTGTTCTACCTCGGTATGCTAAGGACGAGAAGCATATTAGATGGTTTGAACTTCCAAACTGCTTCATTTTCCACAATGCCAATGCATGGGAGGAGGAGGATGAAGTTGTTTTGATCACATGCCGCATTGAGAATCCAGATTTGGACATGGTCAACGGAGCTGTCAAGGAAAAGCTTGAAAATTTCTCAAATGAACTGTATGAAATGAGATTTAACATAAAAACTGGTGAAGCTTCTCAAAAGAAACTATCAGCATCTGCTGTAGATTTTCCTAGAGTGAATGAAAGTTACACTGGAAGGAAGCAGCGATATGTATATGGAACCACGTTAGACAGCATCGCAAAAGTTACCGGTATCATTAAATTTGATTTGCGTGCCAAACCGGATTCTGAAAAAACAAAGCTTGAAGTTGGAGGAAATGTTCAGGGTCTATATGACTTAGGGCCAGGGAGGTTTGGTTCCGAGGCTATTTATGTCCCGTGTGTCCCTGGCACCGATTCTGAAGAAGATGATGGATACTTGATCTTTTTTGTTCATGACGAGAATACCGGAAAATCGTTTGTACATGTCATCGATGCAAAAACAATGTCGGCAGATCCTATTGCTGTTGTTGAATTGCCTCATAGAGTTCCATATGGTTTCCATGCCTTCTTTGTGACAGAGGACCAACTGCAAGAACAGGCCAAACTCTGA 1623 0.406 MEEEKKSSEIVKVEPKPSKGFSSKVIDLIEKVVVKLFYDSSLPHHYLAGNFAPVTDETPPTKDLPVTGYLPDCLNGEFVRVGPNPKFSPVAGYHWFDGDGMIHGLRVKDGKATYVSRFVRTSRLKQEEYFGGSKFMKIGDLKGLFGLLMVNMQILRAKFKVLDVSYGNSTANTALVYHHGKLLALSEADKPYVIKVIEDGDLQTLGLLDYDKRLGHSFTAHPKVDPFTGEMFTFGYSHTPPYVTYRVISKDGYMHDPVPITVSEPIMMHDFAITENYAIFMDLPLYFRPKDMVKKNTLIFTFDSTKKARFGVLPRYAKDEKHIRWFELPNCFIFHNANAWEEEDEVVLITCRIENPDLDMVNGAVKEKLENFSNELYEMRFNIKTGEASQKKLSASAVDFPRVNESYTGRKQRYVYGTTLDSIAKVTGIIKFDLRAKPDSEKTKLEVGGNVQGLYDLGPGRFGSEAIYVPCVPGTDSEEDDGYLIFFVHDENTGKSFVHVIDAKTMSADPIAVVELPHRVPYGFHAFFVTEDQLQEQAKL 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0882 540 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE 1-3 4 536 - -
Lal2g0882 540 Pfam Retinal pigment epithelial membrane protein 51 529 IPR004294 GO:0016702
Lal2g0882 540 PANTHER BETA-CAROTENE DIOXYGENASE 4 536 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0882 Lal-Chr2 5744187 5751912 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0882 2 5744187 5751912 Lal2g0882 2 5744187 5751912 ECH
Lal2g0882 2 5744187 5751912 Lal9g0680 9 4684934 4693913 LSH