Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0761 ATGTCATTGTCATCAATGGAGTCTCTGGTTCTTCAACTCCATGAAATCTCAGCTGTCAAATTTGGCAATTTCAAGCTCAAATCTGGCATCTCCTCGCCAATCTACATAGACCTCCGGCTCGCTATATCTTACCCTTCTGTCCTCCGGCAAATTTCTCAAACCCTCATTTCCTCTGTCTCTAAAACTTCATTTGACCTTGTTTGTGGTGTCCCATACACTGCTCTACCAATTGCCACTTGCGTGTCTGTCACTCAGAACATCCCTATGGTCATGCGCCGTAAGGAAATCAAAGACTATGGCACTTGTAAAGCCATTGAAGGTGATTTCAAGACTGGCCAAAGTTGCTTGATAATCGAGGATCTAGTTACTAGTGGCACATCAATTTTGGAAACTGCTGCACCACTGCGTTCCATTGGGTTGAAGGTCAGTGATGCCGTTGTTTTGATCGATAGAGAGCAAGGTGGGAGAGAGAATTTGGAGAGTAATGGAATCAATCTGCACGCCATTCTTAAATTAACTGAAATGGTGAAAATTTTGAGGGAAAAAGAAAGGGTTGATGAGGAGATGGTAGGAATTGTTATGAGATTCTTAGAGGAAAATCGGAAGGTTGCTGCTATGGCAACTAGAGCTAAGGTGAAAGCCTTGTCATTTTTGGAGAGGGCTAAGTTGTCCAAGAATCCGACAGGAAAGAGGTTATTTGAGATAATGGCTGAGAAGGAGAGTAATCTGTGTTTGGCTGCAGATGTTGGAACTGCTGCTGAATTGCTTGAAATTGCTGACAAGGTTGGGCCTGAGATATGCTTATTGAAAACTCATGTGGATATTCTTCCAGATTTTACACCCGACTTCGGTTCGAGGCTTCGCTCGATTGCAGAAAAACATAACTTCTTGATCTTTGAAGATCGCAAATTTGCTGACATTGGTAACACGGTGACCATGCAGTTTGAAGGAGGGATCTTTCATATACTGGATTGGGCTGATATAGTAAATGCTCACATTATCTCTGGTCCTGGAATTGTGGATGGACTGAAATTGAAGGGTTTGCCTCGTGGAAGGGGTTTGTTGCTGCTCGCTGAAATGAGTTCAGCTGGTAACCTTGCCAAGGGAGATTATACCACTGCTGCGGTGAAAATTGCTGAGGATCATTCTGACTTTGTTATCGGCTTCATCTCAGTTCATCCAGCATCATGGCCTGGAGCGCCTGCAAATCCCTCTTTCATTCACGCAACTCCTGGAGTTCAAAAGGTGGCGGGTGGTGATGCTTTAGGGCAGCAATATAACACTCCATATTCTTCATATCTTCACCCTATGAATGACTCTGTTGTGGTAGATATGGTTGTCCATGATAGGGGTAGTGACATTATCATAGTGGGCCGTGGCATCATCAAGGCAGAAAATCCATCAGAGGCAGCTCGCGAGTACCGTCTTCAAGGATGGGATGCATATTTGGCCAAGTGCTATTGA 1464 0.4426 MSLSSMESLVLQLHEISAVKFGNFKLKSGISSPIYIDLRLAISYPSVLRQISQTLISSVSKTSFDLVCGVPYTALPIATCVSVTQNIPMVMRRKEIKDYGTCKAIEGDFKTGQSCLIIEDLVTSGTSILETAAPLRSIGLKVSDAVVLIDREQGGRENLESNGINLHAILKLTEMVKILREKERVDEEMVGIVMRFLEENRKVAAMATRAKVKALSFLERAKLSKNPTGKRLFEIMAEKESNLCLAADVGTAAELLEIADKVGPEICLLKTHVDILPDFTPDFGSRLRSIAEKHNFLIFEDRKFADIGNTVTMQFEGGIFHILDWADIVNAHIISGPGIVDGLKLKGLPRGRGLLLLAEMSSAGNLAKGDYTTAAVKIAEDHSDFVIGFISVHPASWPGAPANPSFIHATPGVQKVAGGDALGQQYNTPYSSYLHPMNDSVVVDMVVHDRGSDIIIVGRGIIKAENPSEAAREYRLQGWDAYLAKCY 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0761 487 SUPERFAMILY PRTase-like 6 195 IPR029057 -
Lal2g0761 487 TIGRFAM pyrE: orotate phosphoribosyltransferase 13 174 IPR004467 GO:0004588
Lal2g0761 487 TIGRFAM pyrF: orotidine 5'-phosphate decarboxylase 243 475 IPR014732 GO:0004590|GO:0044205
Lal2g0761 487 Pfam Phosphoribosyl transferase domain 54 157 IPR000836 -
Lal2g0761 487 CDD OMP_decarboxylase_like 243 474 - -
Lal2g0761 487 Gene3D Aldolase class I 213 487 IPR013785 -
Lal2g0761 487 ProSitePatterns Orotidine 5'-phosphate decarboxylase active site. 298 311 IPR018089 GO:0004590|GO:0006207
Lal2g0761 487 SMART OMPdecase_2 242 474 IPR001754 GO:0004590|GO:0006207
Lal2g0761 487 CDD PRTases_typeI 64 171 IPR000836 -
Lal2g0761 487 Hamap Orotate phosphoribosyltransferase [pyrE]. 1 229 IPR023031 GO:0004588|GO:0006221
Lal2g0761 487 PANTHER OROTATE PHOSPHORIBOSYLTRANSFERASE 6 486 - -
Lal2g0761 487 Pfam Orotidine 5'-phosphate decarboxylase / HUMPS family 241 474 IPR001754 GO:0004590|GO:0006207
Lal2g0761 487 PANTHER PHOSPHORIBOSYLTRANSFERASE, OROTIDINE 5-PHOSPHATE DECARBOXYLASE 6 486 - -
Lal2g0761 487 SUPERFAMILY Ribulose-phoshate binding barrel 215 483 IPR011060 -
Lal2g0761 487 Gene3D - 4 212 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0761 Lal-Chr2 4879109 4883697 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0072 18 570606 575714 Lal2g0761 2 4879109 4883697 PCT
Lal2g0761 2 4879109 4883697 Lal18g0072 18 570606 575714 PCT