Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0760 ATGCTGGAGATGTCTATAGAATATGAAAACTCTGATATTAAGGGTGGAATAGATCCACAAAAAAGGCTAACAAATCTGGTGCATCAAGCTGGGAACAATTTGTGTGCTGATTGTGGAACTCCAGAGCCAAAATGGGTTCTATCATTGAAGCTAGATGAATGGACAGATGAACAAGTTGATGCATTGGCGAAGTTCGGAGGAAATAGAATATTAAACAAGAAGTATGAAGCTTGCCTCCCAAGTTACATACCAAAACCAAAACCACATTCTTCCATTGAGGAGCGCTCGGATTTTATTAGGAGAAAATATGAGCTTCTACAATTTCAGGAGTGTGATGACCATTCACCATGCCCCATCCAACCATATCAAGGAAGAATTTCATCATTAGCTCAGAGTAGTTCTTCATGCAACAATTCTCATCCTGACAAGAAACCATATGACAAACACCCAACCAAACATCGTATCGTGCATCCATTTCGAAACAGCTGGGGAAGAAAAGATTCGGAGCATAAGTCTTCTTCAAAGAAGAGCACCTCATTGGCAGGTATGGTTGAATTTGTTGGGTTGATAAAGGTTAACGTGGTTAAAGGCACGAACCTTGCGGTCCGGGATGTAATGACTAGTGACCCTTATGTCATCCTTTCTTTGGGTCACCAATCAGTAAAAACTCGAGTTATAAAGAACAATTTGAATCCAGTTTGGAATGAAAGCCTCATGCTGTCTATTCCAGAGAACATTCCTCCACTTAAAGTGCTTGTGTATGATAAGGATACATTTTCAACTGATGATTACATGGGTGAAGCTGAAATAGATATTCAACCTCTAGTTTTAGCTGCAAAAGCCTATGAGAAATCTACAATCAATGAGTCCATGCAGCTTGGGAAAAGTGTAGCAAGCAAGGACAACACTCTTGTTAGAGATGGTGTCATCTCACTTGATAAAGGGAAGATCAAACAGGAAATCTCAGTGAAACTACAACATGTTGAAAGAGGTGTGCTTGAGGTTGAGCTTGAGTGTGTTCCTCTTACTCAGTAG 1035 0.4019 MLEMSIEYENSDIKGGIDPQKRLTNLVHQAGNNLCADCGTPEPKWVLSLKLDEWTDEQVDALAKFGGNRILNKKYEACLPSYIPKPKPHSSIEERSDFIRRKYELLQFQECDDHSPCPIQPYQGRISSLAQSSSSCNNSHPDKKPYDKHPTKHRIVHPFRNSWGRKDSEHKSSSKKSTSLAGMVEFVGLIKVNVVKGTNLAVRDVMTSDPYVILSLGHQSVKTRVIKNNLNPVWNESLMLSIPENIPPLKVLVYDKDTFSTDDYMGEAEIDIQPLVLAAKAYEKSTINESMQLGKSVASKDNTLVRDGVISLDKGKIKQEISVKLQHVERGVLEVELECVPLTQ 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0760 344 SUPERFAMILY ArfGap/RecO-like zinc finger 20 108 IPR037278 -
Lal2g0760 344 Pfam C2 domain 189 276 IPR000008 -
Lal2g0760 344 PANTHER CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN 46 344 - -
Lal2g0760 344 PANTHER CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN 18 47 - -
Lal2g0760 344 ProSiteProfiles C2 domain profile. 171 286 IPR000008 -
Lal2g0760 344 Gene3D Arf GTPase activating protein 46 115 IPR038508 -
Lal2g0760 344 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 18 47 IPR044518 GO:0005096|GO:0005543
Lal2g0760 344 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 46 344 IPR044518 GO:0005096|GO:0005543
Lal2g0760 344 MobiDBLite consensus disorder prediction 130 151 - -
Lal2g0760 344 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 185 279 IPR035892 -
Lal2g0760 344 SMART C2_3c 189 284 IPR000008 -
Lal2g0760 344 SMART arf_gap_3 20 116 IPR001164 GO:0005096
Lal2g0760 344 Gene3D C2 domain 186 342 IPR035892 -
Lal2g0760 344 CDD C2_ArfGAP 187 331 - -
Lal2g0760 344 Pfam Putative GTPase activating protein for Arf 47 109 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0760 Lal-Chr2 4874547 4878673 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0760 2 4874547 4878673 Lal9g0668 9 4600975 4604046 LSH
Lal20g0785 20 8466993 8475940 Lal2g0760 2 4874547 4878673 PCT
Lal2g0760 2 4874547 4878673 Lal20g0785 20 8466993 8475940 PCT